Vagococcus hydrophili: G7082_13185
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Entry
G7082_13185 CDS
T07081
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vhy
Vagococcus hydrophili
Pathway
vhy03030
DNA replication
vhy03430
Mismatch repair
vhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7082_13185 (dnaE)
03430 Mismatch repair
G7082_13185 (dnaE)
03440 Homologous recombination
G7082_13185 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vhy03032
]
G7082_13185 (dnaE)
03400 DNA repair and recombination proteins [BR:
vhy03400
]
G7082_13185 (dnaE)
Enzymes [BR:
vhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7082_13185 (dnaE)
DNA replication proteins [BR:
vhy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7082_13185 (dnaE)
DNA repair and recombination proteins [BR:
vhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7082_13185 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIL49383
UniProt:
A0A6G8AWW4
LinkDB
All DBs
Position
complement(2678637..2681939)
Genome browser
AA seq
1100 aa
AA seq
DB search
MELGQLQVLTSYSLLKSTNQIDHLVSKSQELGYSYLAITDIDTMHGVVDFYKTCRKKNIK
PLIGMTLTYQSELIEEKSYPLILIAKTQVGYQNLVKISSMRMENEQLISLNQIEGLTNDL
IAILPSQQNELIAINENKSDLLFEYIRELKIKFPDALYQGVVLQDNHLECLSICQTQEIP
LVALQDVRYLAPSDHFSVEVLKHIESGEQIDIDFEQISGSYYLPEKKSFEASFEASAFKE
ALINNEKIGAMCQFEMLLQQKLLPAFPLEESEDAQSVLKQLCFAGLSERNLENDNQYLER
LSMELSVIHDMGYDDYFLIVWDVMKYARDHNIVTACRGSAAGSLVSYVLRITNVDPIEYG
LLFERFLNKERYTMPDIDMDIPDNKREEVLQYVNQKYGYHRVAQIATFGTLAAKMALRDV
SRVFGLRPNEANTWSNTIPNVLKITLDEAYKKSHKLRDLVAYSEKNTLLFETAKKIEGLP
RHVSTHAAGVVISDQDLTNIIPLQQGSNGIPLTQMAMGEVEEIGLLKMDFLGLRNLSIIG
NTLDSIKYLHKETIDLEGIPLDDEATLEVFRTGNTVGIFQFESEGIKKVLRKLGPTSIED
IASVNALYRPGPMQNIDLFVARKKGKEKISYPHDNLDKILNYTYGIIVYQEQIMQVASLM
AGFSLGQADILRRAISKKKKDVIDIERAHFIKGSKEQGYTEEVASEVYDYIEHFANYGFN
RSHAVVYAVVAYQMAYLKVHYPECFFSALLHSVKNNPTKINEYITEAKKYGVAILPPDIN
KSEYSFNLNKGNILFGFSSLKGIRKDFIQHIINVRKKDGNYSSLENFLIRINGKWLKEAN
ILPLIYIGAFDSLHRNRKQLITDLDSMIRNIEYSGGSIDLLEVLSLKKEDVPDFTLEEKL
NQEAEYLGSYVSGHPIDAYHYLKKGRQIKDLSDSEIGDTGQFLLYITSVKKIRTKKGESM
AFLSGNDGSKEMDITLFPQLFRQLNQDVLENNVYLIGGKIEASKFNQMPQILAESMKSAK
DIPSFESSKKCYIKVTQENDTPVNLNKVKRLLKNNKGDLPVILVFDQKNVLLDEVFWINE
NQEFMEAVFMILGNNTVVFQ
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
gtggaattaggtcaacttcaagtattaacttcatattcattgttaaaaagtaccaatcaa
attgatcatttggtctcaaagagtcaagaactgggatattcctatttagcaattacagat
atcgacacgatgcatggtgtggtcgatttttataaaacatgtcgcaaaaaaaatattaaa
cctttgattggaatgacgttaacctatcagagcgaactaatagaagagaagagttatccc
ttaattttgattgccaagactcaagtaggctatcaaaatttagttaagatttcttcaatg
agaatggagaacgagcaacttatttcattgaatcagattgaaggtttaacgaacgatttg
attgctattttaccgtcacaacaaaatgaattaatcgctatcaatgaaaataaatcagat
ttactgtttgagtacatccgtgagttaaaaattaaatttccggatgctctttatcaaggt
gttgtcttacaagataatcatctagagtgtctatccatttgccaaacacaagaaattcca
ttagttgcgcttcaagacgtcagatacctagcgcctagtgatcatttttctgtggaggtc
ttaaagcacatcgaaagtggcgaacagatcgatatagacttcgaacaaatttcaggctct
tattatttacctgaaaaaaagagttttgaagcaagttttgaagcctctgcttttaaagaa
gcgctaataaacaatgagaaaattggagcgatgtgccaatttgagatgttacttcaacaa
aagttattaccagcgtttcctttagaagaatcagaggatgctcaaagtgttctaaaacaa
ttgtgttttgcagggttgtctgaaagaaatttagaaaacgacaatcagtatttggagcgt
ttatcgatggagctgtctgtcattcatgatatgggctacgatgattactttctaatcgtt
tgggatgtgatgaagtacgccagagaccataacattgtcactgcctgtcgtggttcagca
gctggttctctcgtttcttatgttttgcgcattaccaatgtggatccaatcgaatatggg
ttgctttttgagcgtttcttaaataaagaacggtacacaatgcctgatatcgatatggat
attcctgataacaaacgtgaagaagtattacaatatgtgaatcaaaaatatggttaccac
cgagtagctcagattgcgacctttggaactttagcagctaagatggctttaagagatgta
agccgtgtgtttggcttaagacctaatgaagcgaatacttggtccaatacaattccaaat
gtgttaaaaataaccttggacgaagcatataaaaagtcacataaattacgagacttagta
gcttattctgaaaaaaatactttattatttgaaacagctaaaaaaattgaaggcttacca
agacacgtttccacacatgctgcaggagttgtgattagtgatcaagatttaacgaatatt
atcccactgcaacaaggttcaaatgggattccattaacacaaatggcaatgggtgaagtg
gaagaaattggcttgttgaaaatggattttttagggttacgtaatttatcaattatcggc
aatacacttgattcaatcaaatacttacataaagaaaccatcgatttagaaggaattcct
ttagatgatgaggcgaccttagaggtatttagaacgggcaacacagttgggatttttcaa
tttgaatcagaaggtatcaagaaagttttgagaaaattaggaccgacatccatagaagat
atcgcttctgtgaatgctttgtatcgtccaggacccatgcaaaatattgatttgttcgtc
gctagaaaaaaaggaaaagaaaaaatcagctaccctcatgataatttagataaaatactc
aattatacatacggaattattgtgtatcaggaacaaattatgcaagtcgcttctctgatg
gctggtttttctttaggacaagcagatattttaagacgtgccattagtaaaaagaaaaaa
gatgtcattgatatagaaagagcacattttattaaagggtctaaggaacaagggtacaca
gaagaggttgccagcgaagtttatgattatatcgaacattttgctaattacggctttaac
cgatctcatgctgttgtttatgctgtggtagcctatcaaatggcgtacttaaaagttcat
tatccagaatgctttttttcagctttactgcactcagttaaaaacaatccaaccaagata
aatgaatacatcacggaagcgaaaaaatacggtgtggctattttaccaccagatataaat
aaaagtgagtatagttttaatttgaataaagggaatattctatttggtttttctagttta
aaaggcattcgaaaagattttattcaacatatcatcaatgtcagaaaaaaagatggtaat
tattcctctttagaaaattttttaattagaataaatggcaaatggttaaaagaagctaat
atcttaccattgatttatattggtgcctttgactcactacatagaaatcgaaagcagctg
atcacggatttagacagcatgattagaaacatagagtacagtggtggaagtattgattta
ttagaagttcttagtttaaaaaaagaagatgtgccagattttactttggaagaaaagttg
aatcaagaggctgaatatctaggaagctatgtttcaggtcatccgattgatgcctatcat
tacttaaaaaaaggacgtcaaattaaagatctttctgacagtgagattggagacaccggg
caatttttactctatataacaagtgtaaaaaaaattagaactaaaaaaggggagtccatg
gcatttctttccggaaatgacggctctaaagaaatggacatcacactgtttccccaactt
tttagacaattaaatcaagacgtgttagaaaataatgtatatctcattggtgggaaaata
gaagcgagtaaatttaaccaaatgcctcaaattttagctgaatccatgaaatctgctaaa
gatattccttccttcgagagtagtaaaaaatgttacattaaagtgacgcaagaaaacgat
acacctgttaatttaaataaagttaaacgccttttaaaaaataataaaggtgatttgcct
gtgattttagtatttgaccaaaagaatgttttattagatgaagttttttggatcaatgaa
aatcaggaatttatggaggctgttttcatgattcttgggaataatacggttgtttttcaa
taa
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