Vagococcus hydrophili: G7082_13295
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Entry
G7082_13295 CDS
T07081
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
vhy
Vagococcus hydrophili
Brite
KEGG Orthology (KO) [BR:
vhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vhy03019
]
G7082_13295
03009 Ribosome biogenesis [BR:
vhy03009
]
G7082_13295
Enzymes [BR:
vhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7082_13295
Messenger RNA biogenesis [BR:
vhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7082_13295
Ribosome biogenesis [BR:
vhy03009
]
Prokaryotic type
rRNA helicases
G7082_13295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Kinesin
CMS1
Microtub_bd
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIL49403
UniProt:
A0A6G8AWY4
LinkDB
All DBs
Position
complement(2702321..2703667)
Genome browser
AA seq
448 aa
AA seq
DB search
MNLFKQYNFQEFIMNALDEKKFLKPTEVQEKLIPVVMQGKNVVGQSQTGSGKTHTFLLPM
MNAVDPEKDEVQGIITTPSRELAEQIYQAAVQLAKHSEKEIRVSQYVGGTDKKRQMEKLK
TSQPHIVIGTPGRILDLVNNQSLKTFTANHFVVDEADMTLDMGFLEDVDKIAATLPKGLQ
MLVFSATIPTKLKPFLKKYMDNPVVEHIKPSSVISDTIDNWAISTKGQDVNKVIYQLLNI
GQPYLVMVFANTKQRVNEISTYLKEQGLKVATIHGDIPPRERKRVMKNVQNLDFQFVVAT
DLAARGIDIEGVSHVINTEIPTDLEFFIHRVGRTGRNGLEGTAITLYQPSDENSLAELEK
LGIEFHPKVIRGGEIIDSYDRNRREKRDKSQKQLDISMIGLVKKKKKKVKPGYKKKLQYA
IDDNEKQKRKIDRRQTDRAKRKSRKQDY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttaaacaatataattttcaagaatttataatgaacgctttagatgaaaag
aagtttcttaaaccaacagaagtacaagaaaaattaatcccagttgtcatgcaagggaaa
aacgtggtaggacaatcacaaacaggttctggtaaaacacatacattcttactaccaatg
atgaatgcagtggacccagaaaaagatgaagtacaaggtattattacaacaccaagtcgt
gagctagcggaacaaatttatcaagcggctgttcaacttgctaaacactctgaaaaagaa
atcagagtctctcaatacgttgggggaacagataaaaaacgccaaatggaaaaattaaaa
acaagtcaaccacatatcgtgattggaacaccagggcgaattttagatttagtaaataat
cagtcactaaaaacatttacagccaatcactttgttgtggatgaggcagatatgacactt
gatatgggctttttagaagatgttgataaaattgctgcaacgttaccaaaaggattacaa
atgctagtattctcagcaactattccaactaaattgaaaccattcttaaaaaaatatatg
gacaatccagtggttgaacatattaaaccatcatcagttatttcagatacaattgataac
tgggcaatctcaactaaaggccaagatgttaataaggttatctatcaattattaaatata
ggtcaaccgtatttagtgatggtctttgcgaatacgaaacaacgtgtgaatgagatttca
acgtatttaaaagagcaaggcttaaaagttgcgacaattcatggagatattccgccacgt
gaaagaaaacgtgtcatgaaaaatgtccaaaatttagatttccaatttgtggtagcgact
gatttagctgctcgtgggattgatattgaaggtgtttctcatgttatcaatacagaaatt
ccaacggatttagaatttttcattcaccgtgtaggtcgtactggcagaaacggtttagag
ggaacagcgattacgttgtaccaaccaagtgatgaaaattcactagctgagttagaaaaa
ttaggaattgagtttcatccaaaagtaattcgtggtggagaaattatcgattcttatgac
cgtaaccgtcgtgagaaacgtgataaatcacaaaaacaattagacatatcaatgattggt
ttagttaaaaagaaaaagaaaaaagttaaacctggttacaaaaagaaattacaatacgca
attgatgacaatgaaaaacaaaaacgtaaaattgatcgtcgtcaaactgatcgtgcgaaa
agaaaatcaagaaaacaagattattaa
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