Vibrio sp. MA40-2: ACLKML_10440
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Entry
ACLKML_10440 CDS
T11938
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
via Vibrio sp. MA40-2
Brite
KEGG Orthology (KO) [BR:
via00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
via03021
]
ACLKML_10440 (rapA)
Transcription machinery [BR:
via03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACLKML_10440 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XNQ75287
LinkDB
All DBs
Position
2:complement(635031..637934)
Genome browser
AA seq
967 aa
AA seq
DB search
MAFALGQRWISDTESDLGLGTIVEQDARTVTLMFAASEENRVYAQKDAPITRVIFHVGDT
IESQEGWSLLVEEVREDKGLLTYVGTRQDNQESDIALREIFLSNQIRFNKPQDKLFAGQI
DRMDNFVLRYNALHNQYQQHKSPMRGLCGMRAGLIPHQLFIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERVLIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEACF
EAANPFDTAQYVLCSLGFLTKNQKRFEQIVDGNWDLLVVDEAHHLEWSVDAPSREYQVVE
GLANNTESVLLLTATPEQLGHESHFARLRLLDPDRFYDYQAFVQEEKQYEPVADAVSNLF
SGLTLENSAKNQITELLSEQDVEPLFRIIESDASEQDKANARHELIENLMDRHGTGRVLF
RNTRSAIKGFPQRNVHLLPMEMPDQYARAIRVSNMLDKDLLPEAQAMRKLYPEEIFQDLE
GGSWWQFDSRVNWLIDKVKEKRSEKILVIASRSTTALQLEQALREREGIRATVFHEGMSI
IERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQLRDIDIFVPYLEGSSQGILARWFEEGLQAFSETCPTGRAVYDQYSDDLIDLLAGGKEH
DLEQLIEESNKLNQTLKVQLESGRDRLLEMHSNGGEQALEIVEKIASTDGDTNLVSFALS
LFDTIGLNQDDKGDKALVVTPSEHMMVPSYPGLPYDGATITFDRETALSREDMNFMSWEH
PMIQGGIDLLLSEGVGTTAVSLLKNKALPVGTMLLELIYLVDAQAPKRSGISGYLPKTPI
RLMMDGKGNDLSEQVEFDSFNRQLSPVNRHLANKLVSSVQADIHKLIEAGEKCIDSKLKA
VREQAQNEMSSSLNAELERLQALKAVNPNIRDEELQAIEKQIQQLTGYISQAQIQLDSLR
LIVVSHN
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgctttgggtcagcgctggatcagtgatacagaaagcgatttgggtttaggt
accatcgtagaacaagatgcaagaaccgtaacattgatgtttgctgcgtcagaagaaaac
cgagtctacgcccaaaaagacgccccaataacacgagttattttccatgttggagataca
attgaaagccaagaaggttggtctcttttagttgaagaagttcgagaagataaaggcttg
cttacctatgtaggtaccagacaagataaccaagaaagcgatattgctcttcgtgagatt
tttcttagcaatcaaattcgttttaataaaccacaagataagttgttcgctggtcaaata
gaccgtatggataattttgtattgcgttataacgcgttacacaatcaatatcagcagcat
aaaagcccaatgcgtggtctttgtggtatgagagctgggcttatcccacatcagttattt
attgcccacgaagtcggacgtaggcatgcgcctcgtgttttattggccgatgaagtaggg
ctaggtaaaacgattgaagcagggatgattattcatcaacaagtattatcaggtcgagct
gaacgagtgttgattgttgtaccggaaacattgcagcatcagtggttggttgagatgatg
cgccgttttaatttacatttttctatctttgatgaagaacgctgtatagaagcttgtttt
gaggcggctaatcctttcgacacggctcagtatgtactatgttcgttaggcttcttaact
aaaaaccaaaagcgctttgagcagattgttgatggcaattgggatcttttagttgtcgat
gaagcacaccacttggaatggagtgttgatgcgcctagccgtgagtatcaagtggtagaa
ggtttagctaataataccgaatccgtattattgttaaccgccacgccagagcaattaggc
cacgagagtcattttgctcgtttgcgtttgttagatccagatcgtttttatgattatcaa
gcgtttgtgcaagaagaaaaacaatatgaaccggttgctgatgcggtgagtaacttattt
tctggtttaacactggaaaatagcgctaaaaatcagataacagagttgctttcagaacaa
gatgtagaacctctgtttagaataattgaatccgatgcttctgaacaagacaaagctaat
gcacgtcatgagctaattgaaaacttgatggatcgccacggcacaggacgagtcctgttt
agaaatactcgttctgcgattaaagggtttccacaaagaaacgtacaccttctaccgatg
gaaatgcccgatcaatatgcgcgtgcgatccgtgtttccaatatgttagataaagattta
ttgcccgaagcgcaagctatgagaaaactgtatcctgaagagattttccaggatctagaa
ggtgggtcatggtggcaatttgactcacgtgttaattggttgattgataaagtaaaagaa
aaacgttcagaaaaaatattggtgatagcttctagatcgaccaccgcattgcaattagaa
caagcgttgagagaacgtgaaggtattcgtgcaacggtattccatgaaggaatgtcgatt
attgagcgagataaagccgctgcgtattttgcccaagaagaagggggcgctcaggtactt
atttgttctgaaattggttcagaaggacgtaatttccagtttgcaaatcagttggttatg
tttgatttaccgtttaatccagatttgctagaacaacgtattggtcgccttgatagaatc
ggccaattacgtgatattgatatttttgttccgtatttagaaggttcctctcaaggaatt
cttgcccgttggtttgaagaagggttgcaagctttttccgaaacttgtccaaccggtaga
gcggtttatgatcaatattcagatgatttgatcgatttattagctggtggaaaagagcac
gatttagagcaactcatagaagagtcgaataagttaaatcaaactctcaaagttcaactg
gaaagtggacgagatcgtttactagagatgcattctaatggcggtgagcaagcattagag
atagtagaaaaaattgctagcactgatggagacaccaatttggtttccttcgcgttgagt
ttgtttgacactattggtttaaatcaagatgacaaaggtgacaaagcgttagttgtaaca
ccgtcggaacatatgatggtaccgagttatccagggcttccatacgatggtgcgaccata
acatttgatcgcgaaacggcgctttctcgtgaagacatgaactttatgagctgggaacac
cctatgattcaaggagggatagatcttctgttgagtgaaggggtaggaacaacggcggta
tctttgctaaagaataaagcgttaccggtgggaaccatgttgctggagctgatttattta
gtagatgctcaagcacctaaacgcagtggtattagcggatacctacctaaaactccgatt
cggttaatgatggatggcaaaggcaatgatctttccgagcaagttgaatttgacagtttt
aatcgtcaactaagcccagtcaatcgtcatctagccaataagcttgtgtcgagtgttcag
gcagatatccataaactgattgaagctggagagaagtgtattgacagtaaattgaaggcg
gtacgagagcaagctcaaaacgaaatgtcgagttcgttaaatgcagaattagagcggtta
caagcgctaaaagctgtgaacccgaatattcgtgatgaagaactacaagcaatcgagaag
caaattcaacaattgacgggctacatttctcaggcacaaatccaattggattcattgcga
cttattgtggtttcacataattaa
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