Vibrio sp. MA40-2: ACLKML_12860
Help
Entry
ACLKML_12860 CDS
T11938
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
via Vibrio sp. MA40-2
Pathway
via05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
via00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ACLKML_12860 (fis)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
via03000
]
ACLKML_12860 (fis)
03036 Chromosome and associated proteins [BR:
via03036
]
ACLKML_12860 (fis)
03400 DNA repair and recombination proteins [BR:
via03400
]
ACLKML_12860 (fis)
Transcription factors [BR:
via03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACLKML_12860 (fis)
Chromosome and associated proteins [BR:
via03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ACLKML_12860 (fis)
DNA repair and recombination proteins [BR:
via03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACLKML_12860 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HTH_30
Baseplate_J_C
HetZ
DUF5805
MHB
HTH_28
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
XNQ75711
LinkDB
All DBs
Position
2:complement(1128138..1128434)
Genome browser
AA seq
98 aa
AA seq
DB search
MFEQNLTSEPLTVTTVTSQDQVTQKPLRDSVKASLKNYLAQLNGQDVDDLYELVLAEVEQ
PLLDTIMQYTRGNQTRAANMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatttaacttctgaaccactaacagtcactactgtaacttcacaagat
caagtaactcagaagcctctacgtgactctgtaaaagcatctttgaaaaattaccttgct
cagttaaatggtcaagacgttgacgacctgtacgaactagtattggcagaagttgagcaa
ccattactagacaccatcatgcaatatactcgcggtaaccaaactcgcgcagcaaatatg
atgggtatcaaccgtggtactcttcgtaaaaaactaaaaaaatacggcatgaactag
DBGET
integrated database retrieval system
