Vibrio sp. STUT-A11: VspSTUT11_00040
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Entry
VspSTUT11_00040 CDS
T10419
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vib Vibrio sp. STUT-A11
Brite
Enzymes [BR:
vib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VspSTUT11_00040 (gyrB)
DNA replication proteins [BR:
vib03032
]
Prokaryotic type
DNA Topoisomerases
VspSTUT11_00040 (gyrB)
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VspSTUT11_00040 (gyrB)
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Gene cluster
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Other DBs
NCBI-ProteinID:
BDR12028
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Position
1:3674..6091
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AA seq
805 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKDIV
VTIHEDNSVSVSDDGRGIPTEIHSEENVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKVELTIHRGGHIHTQTYRHGEPQAPLAIVGDTDKTGTQIRFWPSGETFTNTE
FHYDILAKRLRELSFLNSGVSIKLSDEREEDKHDHFMYEGGIQAFVQHLNTNKTPIIEKI
FHFNFEREDGIAVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNTFMDK
EGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSE
FLVENPSEAKMVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKK
GKQEQYIKDEEAMNQYQVSLALDNASLHVNAEAPALAGESLEKLVQQYNAGIKLAERMSR
RYPSALMHELIYTPRLTPEQCHDAAAVEAWTKQLVEQLNAKEVGASQYSFEVEQHAELGL
SLPKIIVRTHGVTHEHALSIDFLNSKEYSKLADLSEALDGLIEEGAYIKRGERTLAVSSF
AEALAWLVKESMRGLSRQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTT
LMGDQVEPRRNFIEENALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaattacgattcatcgagtattaaagtactgaagggtctggatgcggtacgt
aagcgtccaggtatgtacatcggcgatacggacgacgggaccggcctgcaccacatggtt
ttcgaggtggtggataactcaattgatgaagcgttggcaggtcactgtaaagacatcgtt
gtgacaattcatgaggataactctgtttccgttagcgatgatggccgtggtataccaaca
gaaatccactcagaagaaaatgtctcagcagctgaagttatcatgacggttcttcacgct
ggcggtaagttcgacgataactcgtacaaagtatcgggtggtctgcacggtgtaggtgtt
tcggtagtaaacgcgctgtctgaaaaagttgaactgaccattcaccgtggtggccatatc
catactcaaacctaccgtcacggcgagcctcaagctcctctggcgattgttggtgatacg
gataaaaccggtacacaaattcgcttctggccaagtggtgagactttcactaacacagaa
ttccattacgacattctagctaaacgtctgcgtgaactatcgttcctgaactctggcgtt
tctatcaagctgtcagatgaacgtgaagaagataagcatgaccacttcatgtacgaaggt
ggtattcaggcatttgttcagcacttaaataccaacaaaacaccaatcatcgagaaaatc
ttccactttaactttgagcgtgaagacggcattgcagtcgaagtggcaatgcaatggaac
gatggtttccaggaaaacatcttctgttttactaacaacattccacagcgtgatggtggt
actcacctcgctggtttccgtgctgcgctgacgcgtacgctgaacactttcatggataaa
gaaggtttctcgaagaaagcgaaaacagcaacctcaggcgatgacgcacgtgaaggtctg
actgctgtggtttcggtgaaagtgcctgatccaaaattctcaagccaaaccaaagacaaa
ctggtttcatcagaagtgaaatcagcagttgagtcggcgatgggtgaaaaactttcagaa
ttcttagttgaaaacccgagtgaagcgaagatggtttgttctaaaatcatcgatgcagcc
cgcgcacgtgaagccgcacgtaaagctcgtgaaatgactcgtcggaaaggtgcgctagac
ctagcaggccttccgggcaaacttgctgactgtcaggaaaaagatccggcactctctgaa
ctatatattgtggagggtgactctgcgggcggtagtgctaagcagggtcgtaaccgtaag
aaccaggctatcctgccgctgaaaggtaagatcctgaacgtagagaaagcacgtttcgac
aagatgctttcttcacaagaagtcgcgacgcttatcacggcactaggttgtggtattggt
cgtgacgaatataacccggacaaactgcgttaccacaacatcatcatcatgaccgatgcc
gacgtcgatggttcgcacatccgtacgctactgttgactttcttctaccgccaaatgcca
gagcttattgagcgtggctacgtgtacatcgctcagccaccactatacaaagtgaaaaaa
ggcaaacaagagcagtacatcaaagatgaagaagcgatgaaccaataccaggtatcactg
gcactggataacgcatcactgcacgttaacgcagaagcgccagctcttgcgggtgaatcg
ttagagaaactggttcagcaatacaatgcgggcattaagctagctgagcgtatgagccgt
cgctacccaagcgcattgatgcacgagctgatttacacgccgcgtttgacaccagaacaa
tgtcacgatgcagcagcggttgaagcttggactaagcagcttgttgagcagctgaacgca
aaagaagtgggtgcgagccaatacagctttgaggttgaacaacacgcagagcttggtctg
agcttacctaagatcatcgtacgtactcatggtgtgacacatgaacatgcactaagcatc
gacttcctgaattcgaaagaatacagcaagttggcggatctgtctgaagcgttggatggt
ctgatagaagaaggcgcttacatcaaacgtggcgagcgtactctggcagtttcaagcttt
gcagaagcgctagcgtggctggttaaagagtccatgcgtggtctaagccgtcagcgctat
aaaggtttgggtgagatgaatccagatcagctttgggaaaccacaatggacccagagacg
cgccgtatgatgcaagtaaccattgaagatgctgttggtgcagaccagttgttcacaacg
ctaatgggcgaccaggttgagccgcgtcgtaacttcattgaagagaacgcactgaaggtt
gctaacctagacgtgtag
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