Vibrio sp. STUT-A11: VspSTUT11_00170
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Entry
VspSTUT11_00170 CDS
T10419
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00071
Fatty acid degradation
vib00280
Valine, leucine and isoleucine degradation
vib00310
Lysine degradation
vib00362
Benzoate degradation
vib00380
Tryptophan metabolism
vib00410
beta-Alanine metabolism
vib00640
Propanoate metabolism
vib00650
Butanoate metabolism
vib00907
Pinene, camphor and geraniol degradation
vib00930
Caprolactam degradation
vib01100
Metabolic pathways
vib01110
Biosynthesis of secondary metabolites
vib01120
Microbial metabolism in diverse environments
vib01200
Carbon metabolism
vib01212
Fatty acid metabolism
Module
vib_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VspSTUT11_00170 (fadB)
00650 Butanoate metabolism
VspSTUT11_00170 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VspSTUT11_00170 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VspSTUT11_00170 (fadB)
00310 Lysine degradation
VspSTUT11_00170 (fadB)
00380 Tryptophan metabolism
VspSTUT11_00170 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VspSTUT11_00170 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VspSTUT11_00170 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VspSTUT11_00170 (fadB)
00930 Caprolactam degradation
VspSTUT11_00170 (fadB)
Enzymes [BR:
vib01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VspSTUT11_00170 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VspSTUT11_00170 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VspSTUT11_00170 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VspSTUT11_00170 (fadB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Carboxyl_trans
DAO
Motif
Other DBs
NCBI-ProteinID:
BDR12041
LinkDB
All DBs
Position
1:complement(19782..21953)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALIAHQGLKGVMLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVIKGHALGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADNAMEIITQGKALRADEALK
LGLLDAVVDSDSLHASALQTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPITSVLTIEEGARFARNEALDVERKHFVKLAKSEEAKSLVGLFLSDQYIK
GIAKKAAKSANKDTKRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQASLDLGMNEASKL
LNKRLATGRLDGFKMAGILASITPSLHYAGIENSDVIVEAVVENPKVKSAVLSEVEQNVG
EDTVITSNTSTIPINVLAQSLQRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQSVMAEGFPERMGKQGRDAIDTLFEANKFGQKNGSGFYSYSVDKKGK
PKKTFSEEILPLLADVCADKQDFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEYIETAKQHAELGAMYHVPQMLIDMAAKGETFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaaatacaggatggtattgcagagctg
agtttctgctcgccaaaatccgtaaataaacttgatttagcgacgcttgagtcactagac
aaagcccttgatgcacttatcgcacaccaaggtctgaaaggcgtaatgctgacttcagat
aaagatgcgttcattgtaggtgcagacattactgaattcttaggcctgtttgctaagact
gatgccgagctggatcagtggctacaattcgccaacagcatcttcaataaacttgaagat
ctaccagtaccaaccatctctgtcatcaaaggccatgctcttggtggtggctgtgagtgt
gtattggcaacagacatgcgtatcggtgacaaaaccaccagcattggtctgccagaaacc
aaacttggtatcatgccaggctttggtggctgtgtacgcctgcctcgtgttatcggcgct
gataacgcgatggaaatcattacacaaggtaaagcgctccgtgctgatgaagcactaaaa
cttggcctgttagatgcggttgtcgattcagactctctacatgcatccgctctgcaaaca
ctgacatctgcaatcaacgaaaaacttgattggcaagctcgccgcaaacaaaagacatca
ccactaacgctaagcaagctagagtcgatgatgagcttcacgatggcaaaaggcctggtg
gcacaaaaagcgggcccacactacccagcaccaataacatcagtccttactattgaagaa
ggcgctcgatttgcacgtaatgaagcgctggatgttgaacgtaagcacttcgttaaactg
gcaaaatcagaagaagcgaaatcactggttggtctgttccttagcgatcagtacattaaa
ggcatcgctaaaaaagcggcaaaatcagcaaacaaagacactaaacgtgcagcagtcctt
ggcgcaggtatcatgggtggcggtatcgcttaccaatctgcactgaaaggtgtgcctgta
ctgatgaaagacatcgctcaagcctcattagatttgggcatgaacgaagcgtcaaaactg
ctgaataagcgtcttgcaacgggtcgtcttgacggtttcaagatggcgggtatcctcgcg
tctattactccaagcttgcactacgctggcatcgaaaactcagatgtgattgtcgaagcc
gtggttgagaacccgaaagtaaaatctgcggtacttagcgaagtcgagcaaaacgttggc
gaagatacggttatcacgtcgaacacatcgaccattccaatcaatgtcttggctcagtca
ctacaacgcccagaaaacttctgtggtatgcacttctttaaccctgtgcatcgtatgccg
ttagttgagatcatccgtggtgaaaaaacgtcagatgaaaccatcaaccgtgttgtggct
tacgcagcgaaaatgggtaaatcaccaatcgtcgttaatgattgccctggattcttcgta
aaccgcgtactgttcccgtactttggtggtttcagcatgctacttcgtgacggcgctgac
ttcacgcaaatcgacaaaatcatggaacgcaagtttggttggccaatgggtccggcatac
ttgcttgacgtggtaggtatcgataccgctcaccacgcacaatccgtcatggctgaaggc
ttcccagagcgtatgggcaagcaaggccgcgatgccattgataccttgttcgaggctaat
aaatttggtcagaaaaacggcagcggcttctacagctactctgttgataagaaaggtaag
ccgaagaagaccttctctgaagagatcttaccgctactggctgacgtgtgtgcagacaaa
caagacttcgacgagcaaaccatcatccaacgtatgatgattccgatgatcaacgaagtg
gtgctgtgtctacaggaaggcattatcgccactccacaagaagcggatatggctctggtt
tacggtctgggcttccctccattccgcggcggtgtgttccgctacctagacagcgttggt
attgctgaatacatcgaaacagcaaaacaacacgctgaactaggcgcgatgtaccacgta
ccgcaaatgctgattgatatggcagccaaaggcgagaccttctacggcgcacaacagcaa
ggttctatctaa
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