Vibrio sp. STUT-A11: VspSTUT11_00890
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Entry
VspSTUT11_00890 CDS
T10419
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vib03021
]
VspSTUT11_00890 (rpoH)
Transcription machinery [BR:
vib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VspSTUT11_00890 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
HTH_3
KORA
2Fe-2S_thioredx
Sigma70_r4_2
GntR
Motif
Other DBs
NCBI-ProteinID:
BDR12113
LinkDB
All DBs
Position
1:115085..115942
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AA seq
285 aa
AA seq
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MTKEAYPMALVTQDSLDSYIRSVNSYPMLTVDEERELAERLHYKGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPAEVREMESRLAAVDS
TFDMPTDEDDSSNNYTAPMLYLEDKSSDVADNVEAANWEMHTNNRLGHALASLDERSQRI
VRSRWLDDEKSTLQELADEFGVSAERIRQLEKNAMKKLKLAVGEF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagcgtatccgatggctctagtcacgcaagatagtcttgatagctatatt
cgctccgttaacagctacccaatgctgacggtagatgaagagcgtgagctggcagaacga
ttacactacaaaggtgagattgaagccgcgaaagggctgatcctatcgcacctgagattc
gttgttcacgttgctcgaggttactcaggctacggtttgccaatggcagacttagtgcaa
gagggtaatatcggcctaatgaaagccgttaagcgttttaacccagaagtgggtgtgcgt
ttggtgtcttttgcggtccactggattaaagctgagattcatgaatacgtgctgcgtaac
tggcgtattgttaaaatcgcaacgaccaaagcacaacgtaaattgttctttaacctgcgc
aagtcgaaaaagcgtctgggttggttcaataacggcgaagtcgaaaccgttgctcgtgaa
ttaggtgttgagcctgcagaagtccgtgagatggagtcccgtctggcggcagtcgactct
acgttcgatatgccaaccgacgaagacgatagctcaaacaactacactgcaccgatgctt
tatctggaagataaatcgtcagatgttgctgataacgttgaagcagcaaactgggaaatg
cataccaacaatcgtcttggtcatgcattggcaagcctggatgagcgtagtcagcgtatt
gtacgttctcgttggttagatgatgagaaatccacactgcaggagctggctgatgagttt
ggtgtgtctgccgagcgtattcgtcagctggaaaagaatgcaatgaagaagctcaaactg
gccgttggtgagttctaa
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