KEGG   Vibrio sp. STUT-A11: VspSTUT11_01430
Entry
VspSTUT11_01430   CDS       T10419                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vib  Vibrio sp. STUT-A11
Pathway
vib03030  DNA replication
vib03430  Mismatch repair
vib03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VspSTUT11_01430
   03430 Mismatch repair
    VspSTUT11_01430
   03440 Homologous recombination
    VspSTUT11_01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vib03032]
    VspSTUT11_01430
   03400 DNA repair and recombination proteins [BR:vib03400]
    VspSTUT11_01430
Enzymes [BR:vib01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VspSTUT11_01430
DNA replication proteins [BR:vib03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VspSTUT11_01430
DNA repair and recombination proteins [BR:vib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VspSTUT11_01430
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: BDR12167
LinkDB
Position
1:complement(198295..198924)
AA seq 209 aa
MNWLQRKYWHYKLKGSPYQSLFCVPNKTELVSLDCETTSLDPNRAELVTIAATKIIDNRI
ITSQPFEVHLRAPQSLDSGSVKIHKIRHQDLVDGISEKDALLKLIDFIGNRPLVGYHIRY
DKKILDLACQRQLGFPLPNPLIEVSQIYHDKLERHLPNAYFDLSLDAICKHLELPIQDKH
DALQDAISAALVFVRLTKGDLPSLSVPYT
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaattggctacaacgaaaatattggcactataagctgaaaggctcgccttatcagtcg
ctattttgtgtaccaaataaaaccgagctggtttctctcgactgcgaaaccaccagctta
gatcccaatagagccgagctggtgaccatcgcagccactaagatcattgataaccgcatc
atcaccagccagccatttgaagtgcacctacgtgcaccacaatcgctcgattccggctcg
gtgaaaatccataaaattcgccatcaggatttagtcgacggcatcagcgaaaaggatgcc
ctactgaagctcatcgactttatcggcaatcgaccgttagtcggctaccacattcgctac
gacaaaaaaatcttggatctcgcctgtcaaagacaactgggcttccctctgcccaaccct
cttattgaagtaagccagatttaccacgacaagctggagcgacatctacctaatgcctat
ttcgacttaagtctggatgccatttgcaagcaccttgagctaccaattcaagacaagcac
gacgctttgcaagatgcgatatccgcagcattggtttttgtgcgtttgaccaaaggcgat
ttaccgagtctcagcgtgccatacacttaa

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