Vibrio sp. STUT-A11: VspSTUT11_01680
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Entry
VspSTUT11_01680 CDS
T10419
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VspSTUT11_01680 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vib03019
]
VspSTUT11_01680 (groL1)
03110 Chaperones and folding catalysts [BR:
vib03110
]
VspSTUT11_01680 (groL1)
03029 Mitochondrial biogenesis [BR:
vib03029
]
VspSTUT11_01680 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vib04147
]
VspSTUT11_01680 (groL1)
Enzymes [BR:
vib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VspSTUT11_01680 (groL1)
Messenger RNA biogenesis [BR:
vib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VspSTUT11_01680 (groL1)
Chaperones and folding catalysts [BR:
vib03110
]
Heat shock proteins
HSP60 / Chaperonin
VspSTUT11_01680 (groL1)
Mitochondrial biogenesis [BR:
vib03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VspSTUT11_01680 (groL1)
Exosome [BR:
vib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VspSTUT11_01680 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
VspSTUT11_01680 (groL1)
Exosomal proteins of breast cancer cells
VspSTUT11_01680 (groL1)
Exosomal proteins of colorectal cancer cells
VspSTUT11_01680 (groL1)
Exosomal proteins of bladder cancer cells
VspSTUT11_01680 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDR12192
LinkDB
All DBs
Position
1:228059..229705
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDVSVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEVGLELEKVTLEDLGQAKRVAITKENTTIIDGIGEEAMIQGRVTQIRQQIEESTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKIVDLQGDNEEQNVGIRVALRAMEAPIRQITKNAGAEDSVVANNVKAGDGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDGAGMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgcacgagttaagatgctagaaggtgta
aacgttctggctgacgcggtaaaagtgacattaggtcctaaaggccgcaacgtcgttcta
gataaatctttcggtgcaccaacaatcactaaagatggtgtatctgtagcgcgcgaaatc
gaactggaagacaagttccagaacatgggcgctcaaatggttaaagaagtagcatctaaa
gcaaacgatgctgcaggtgacggtacaacaacagcaacagtactggcgcaatcaatcgta
aacgaaggtctgaaagcagtagctgcgggtatgaacccaatggatcttaagcgcggtatc
gacaaagcagtagcagcagcagttgaacagctaaaagagctgtctgttgagtgtaacgac
actaaagctatcgcacaggtaggtactatctctgcgaactctgacgtaagcgtaggtaac
atcattgccgaagcaatggaacgtgttggtcgcgatggtgttatcactgttgaagaaggt
caggcgctacaagacgagctagacgtagttgaaggtatgcagttcgaccgcggttacctg
tctccttacttcatcaacaaccaagaagcaggttctgttgatctagaaaacccattcatc
ctgttagttgataagaagatctcaaacattcgtgaacttctaccaacactagaagcggtt
gctaaagcctctcgtccactgctaatcatcgcagaagacgtagaaggtgaagcgctagca
acactagttgtgaacaacatgcgtggtatcgtgaaagtggcggcagtaaaagcaccaggt
tttggtgaccgtcgtaaagcaatgctacaagacatcgccgttctaactggcggtacagtg
atttctgaagaagtaggtctagagcttgaaaaagtaacactagaagacctaggtcaggcg
aagcgcgttgcgatcacgaaagaaaacacaactatcatcgatggtatcggtgaagaagcg
atgatccagggtcgtgtcactcagattcgtcaacaaatcgaagaatcaacttcagactac
gacaaagagaaactacaagagcgcgtagctaagctagctggcggtgttgcagtaatcaaa
gttggtgcagcaactgaagttgaaatgaaagagaagaaagaccgcgtagaagacgcacta
cacgcaactcgcgccgcagttgaagaaggcgtagtcgcaggtggtggtgttgctctaatc
cgtgcagcatctaagattgttgacctacaaggtgacaacgaagagcaaaacgttggtatc
cgcgttgcactacgtgcaatggaagcgccaatccgtcaaatcaccaagaacgctggtgct
gaagactcagtagtcgcgaacaacgtgaaagcgggcgacggcagctacggctacaacgcg
gcaaccggcgagtacggcgacatgctagagatgggtatcctggatccaactaaagtaact
cgtagcgctctacagttcgcagcatcggttgcaggtctgatgatcacaactgaagcaatg
gttactgacctaccacagaaagacggcgcaggcatgcctgatatgggcggcatgggcggt
atgggtggtatgggcggcatgatgtag
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