Vibrio sp. STUT-A11: VspSTUT11_02160
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Entry
VspSTUT11_02160 CDS
T10419
Name
(GenBank) transcriptional regulator Crp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vib Vibrio sp. STUT-A11
Pathway
vib02020
Two-component system
vib02024
Quorum sensing
vib05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VspSTUT11_02160
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VspSTUT11_02160
05111 Biofilm formation - Vibrio cholerae
VspSTUT11_02160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vib03000
]
VspSTUT11_02160
Transcription factors [BR:
vib03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
VspSTUT11_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
HTH_24
HTH_23
MarR
MarR_2
Sigma70_r4
HTH_36
HTH_11
Exonuc_VII_L
HTH_28
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BDR12240
LinkDB
All DBs
Position
1:complement(282189..282821)
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQ
MARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctaggtaaacctcaaaccgacccgacattagagtggtttctttcacactgtcac
attcataagtacccttcaaagagcacgctgattcacgctggtgaaaaagctgaaacctta
tactacatcgttaaaggttctgttgcggttcttatcaaagacgaagaaggtaaggaaatg
atcctttcttacctaaaccaaggtgactttattggtgaacttggtctattcgaggaagac
caagagcgtacagcttgggttcgagctaaatctccttgtgaagttgctgagatttctttc
aagaaattccgtcagcttatccaagtaaacccagacatcctaatgcgtctttctgcgcag
atggctcgtcgccttcaagtaaccagccaaaaagtgggtgacctagcgttcctagacgta
actggtcgtatcgctcagacgcttctgaaccttgcaaaacaaccagacgcgatgactcac
ccagatggcatgcaaatcaagatcactcgtcaagaaatcggtcaaattgttggctgttct
cgtgagacagttggtcgtatcttgaagatgctagaagagcagaatctaatctctgcgcac
ggtaaaactatcgtcgtttacggtactcgttaa
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