Vibrio sp. STUT-A11: VspSTUT11_04780
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Entry
VspSTUT11_04780 CDS
T10419
Name
(GenBank) LuxR family transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vib Vibrio sp. STUT-A11
Pathway
vib02020
Two-component system
vib02024
Quorum sensing
vib05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VspSTUT11_04780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VspSTUT11_04780
05111 Biofilm formation - Vibrio cholerae
VspSTUT11_04780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vib03000
]
VspSTUT11_04780
Transcription factors [BR:
vib03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VspSTUT11_04780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
DUF3755
Radial_spoke_3
HTH_7
LacI
Motif
Other DBs
NCBI-ProteinID:
BDR12502
LinkDB
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Position
1:complement(582919..583530)
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AA seq
203 aa
AA seq
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MDSIAKRARTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTR
EDLVDEVLNHVVRQFSNFLSDNIDLDLHARDNIANITSAMIELVNQDCHWLKVWFEWSAS
TRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEICNKHQPEHLTNLFHGICYSLFVQANRF
KGEDELKNLVSSYLDMLCIYERG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggactcaattgcaaagagagcccgtactaggctttcccctattaagcgtaaacaacaa
ctgatggaaatcgcgttggaagtatttgcgcgccgtggcattggccgcggcggtcatgcg
gatatcgctgaaattgcgcaagtttctgttgcaaccgtttttaactacttcccaacccga
gaagatctggtcgatgaagtactgaaccacgtagtacgtcagttctcaaacttcctgtca
gataacattgatttagacctacacgcacgtgacaatattgcgaatatcactagcgcgatg
attgagctagtcaatcaagattgccactggctgaaagtatggtttgagtggagcgcatcg
acacgcgacgaagtttggccactattcgtgtcaaccaaccgcaccaatcagctgttggta
cagaacatgtttatcaaagcaattgagcgtggtgaaatttgcaacaagcatcaaccagaa
catttgactaacctgttccacggcatttgctactcactgtttgtacaagcaaaccgtttt
aaaggtgaagatgagctgaaaaacctggtcagctcatacctggatatgctttgtatctac
gagcgcggttaa
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