Vibrio sp. STUT-A11: VspSTUT11_05590
Help
Entry
VspSTUT11_05590 CDS
T10419
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vib03400
]
VspSTUT11_05590 (radA)
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VspSTUT11_05590 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA
AAA_16
ABC_tran
RecA
AAA_14
AAA_29
AAA_22
zinc_ribbon_6
NTPase_1
AAA_24
Zeta_toxin
Zn_ribbon_8
DUF7125
AAA_5
nSTAND3
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
BDR12583
LinkDB
All DBs
Position
1:688566..689945
Genome browser
AA seq
459 aa
AA seq
DB search
MAKAKRAYVCNDCGADFPRWQGQCNACGSWNTITEVRIAASPTVARNERLSGYAGSATEA
QVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCVLSG
QMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGISGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcatatgtttgtaatgattgcggcgcagactttccgcgttgg
caaggacaatgtaatgcgtgtgggtcgtggaacacgataactgaagtacgcatcgcagca
tcgccaacggtggctcgcaatgagcgtttgtccggctacgctggctctgctactgaggct
caggttcaaacgctgtcagaaatcgacttacaagaagtgccgcgttttaccagtggtttt
aaagagctagaccgtgtactcggtggcggtgtggttcccggcgctgcaatattgattggt
ggtaaccctggtgcaggcaagtcgacactacttttgcaaactatgtgtgtgctatcaggg
caaatgccgacgttatatgtgacgggggaagaatcgctgcaacaggtggcgatgcgagct
tctcgtctcggtttgccaaaagaacacctgaagatgttatccgaaacaaacgtggataag
atctgtcaaattgctgaaaaagagcaacctcgcattatggtgattgactcgattcaggtg
atgcacgtttctgatgttcagtcatcgccaggcagtgtcgcgcaggttcgtgaatccgca
accgcgctgacgaggtacgcaaaacagaacaatgttgcggtatttatcgtgggtcacgta
acgaaagatggtacgcttgctggcccgaaagtccttgaacacatcattgactgttcagtt
ttgcttgatggtggcacagatagccggttccgtacgttgcgcagccacaaaaaccgtttt
ggcgcagtgaatgaacttggtgtatttgcgatgacaggccaggggctcaaagaagtcagc
aacccatcggcgattttcctttcccgtggtgaagaagagacgtcaggttcttcggttatg
gtggtgtgggaagggactcgtcctctactggtcgagatacaagccctggttgattactca
cagctagccaacccacgccgagttgcagtgggtctggagcaaaaccgcctgtctttacta
ttagctgtgctgcataaacacggcggattacaaatggcggaccaagacgtgtttgttaat
gtcgtcggtggtgtgaaagtgaccgagaccagcgccgatcttgcgttagttatggcgtta
ctttcgagctttcgtgatcgtgctctgcccaaagatgtggttatctttggtgaggttggc
ttagcgggtgaaattcgtcctgtgccgagcgggcaggagcgattaaatgaagcgtttaag
cacggctttaaaaaagccattgttccggctgcgaatatgcccaaaggcggtatttcgggc
atgcaaatacacggggttaagaagttatcagaggcaatcgaagcatttgatgagttatag
DBGET
integrated database retrieval system
