Vibrio sp. STUT-A11: VspSTUT11_05980
Help
Entry
VspSTUT11_05980 CDS
T10419
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib03440
Homologous recombination
Brite
Enzymes [BR:
vib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VspSTUT11_05980 (recC)
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VspSTUT11_05980 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDR12622
LinkDB
All DBs
Position
1:731831..735322
Genome browser
AA seq
1163 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRLSPLENPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWEMFTQVLPDVPKRSAFNKEAMTWKLMHLLPGLLNQETFSPLAQYLKDDSD
NSKLYQLAEKVADIFDGYLVYRPEWIANWEAGQSVPELEDEHPWQPILWQALYDHTVSLG
QSPYHRANLYEHFIDTLENFNSNFDHLPKRLFVFGISSLPPRYMDALKAIGEHIDVHLMF
TNPCRYYWGEVRDRKYLARLAARHRQHVVWQDDHSETQGETEQLKGSVEDNVLDELHTDV
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDVDRDSLLHQLQADILNLEEHQDDQQIE
HSGHKQVVSLGDKSLSLHACHSPMREVEVLHDQLLAMFDADPSLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILAAFMHLVNLPNTRCLASELLELLETPAI
LKRFELSEDDFLQAKQWVEASGIRWGLDANTGREFELPETRQNTWQFGIQRMLLGYAMPE
SAGLFETEQGSLSPYNEVQGMGAELAGKLAHFIQQVSTYRSKLAHVQTIDGWRETLVTLL
DDFFSVELEGEMALKSIRDTLSQLKEQLADAAFEEALSPAIISQYLQDKLSGTRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMTGRTKPGDRSRRDDDRYL
FLEAMLSAQQTLYISYVGRSIQDNTERVPSVLVSELMEYCHQNYCLGGDEGLLVDDSGDN
LLKALVNTHAMVPFSPSAFQGMHSSYAKEWIPAALTQSSQSQGYVRHDFNRALDDYLLGA
TFPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFVLGGLESYQMRDELLE
TLLETTLMQPEKKTDVLKHFMSQQRAQGKLPVGAFGDIEFETNRVQAEELVDKLAFLSGA
PQDDLEIDLTFDALFEGNEGDEKKVRLTGWLTQCYQSGLIRYRSGRVRSQDYLAAWIDHL
AMSASGHAKKTHIIGYDRKEGAVHLIYPEIADASYAKQLLTELVRLFFEGMTKPLPYFPQ
TALACVEAGFSRGQWADDEEKSLKKMADTFNDGYMSTGEGNNAYIARIWSAWSDNLATEV
RLLTALVLQGARLVVQDADDIKE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttatcactccaatcaagtcgacgttcttaaatcacttcttgttgaactg
attcgacttagtccgctggaaaacccgttcgaaaaagaacaaattctggtgcaaagccca
ggtatgtctcagtggctgaaaatggaactggccaaagagtttggtgtggcggcgaacatc
gattttccgctgcccgcgacttttatttgggaaatgttcacccaggtattacctgatgtg
ccaaaacgcagtgcatttaacaaagaagccatgacgtggaagttgatgcacctgttgcca
gggcttctaaaccaagagacgttttcaccgttggcgcaatatctcaaagacgacagtgat
aactccaagctgtatcagctggctgagaaagttgccgacatttttgatggctacctggta
taccgtccggaatggatcgccaactgggaagcgggtcagagtgtgccagagctggaagac
gaacatccgtggcagccaattttgtggcaagcattgtacgatcacacggtctcgctgggg
caatctccttatcatcgtgccaacctttatgaacattttatcgacacgttagagaacttt
aacagcaacttcgaccatttgcccaagcgtttgtttgtttttggtatctcctctttacca
ccacgttacatggatgcgctaaaagcgattggtgaacacatcgacgtacatttgatgttt
accaacccatgtcgttactactggggtgaggttcgagatcgcaagtatctggctcgtttg
gctgcgagacatcgtcaacatgtggtatggcaggatgatcactccgaaacgcaaggtgaa
accgagcagctgaaagggtctgtagaagacaatgtgctcgatgaactgcacaccgatgtg
gtcggaaacagtctattggcttcgatgggcaaacttggccgcgacaacatgtatctgctt
tctcagctggagtcccatgagattgaagcgtttgttgatgtcgatcgagacagtctgctc
catcaactgcaagcagatattttaaaccttgaagaacaccaggacgaccagcagattgag
catagtggccacaagcaagtggttagtctgggcgacaaatcgctaagtctacacgcttgt
cacagcccaatgcgtgaagttgaagtgcttcatgatcaacttctggcgatgttcgatgcc
gatccgagcttaaagccacgcgatattatcgtcatggtggcggacatcaacgcctacagt
cccgcgattcaggcagtatttggtaatgcgccgggtgagcgttttattccgtattcgatt
tcagaccgaacggcggatcaggagagcccgattcttgcggcatttatgcatttggtcaat
ttacccaatacgcgctgcttggcatcggaattacttgaactgctggaaactccggcgatc
ttgaagcgttttgagctcagtgaagacgatttcttacaagccaaacagtgggttgaagcc
tcgggtattcgttggggattggatgccaataccggacgcgaatttgaactgccggaaacg
cgtcaaaacacctggcagtttggcattcagcgaatgttactgggttatgcgatgccagaa
tccgcaggcttgtttgaaaccgagcaaggcagtttatctccttacaacgaagtgcaaggc
atgggcgcagagcttgcgggcaagttagcgcactttatccaacaagttagcacctatcgc
agcaaactcgcccatgttcagacgattgatggctggcgagaaacgttagttacactgttg
gatgacttcttctccgtcgagttggaaggcgaaatggcgctcaaatccattcgcgatacg
cttagccaactgaaagaacagctcgccgatgccgcattcgaagaggcattgtcaccagca
atcatcagccaatatttgcaagataaactgtccggtacgcgagtcagccagcgtttcctt
gccggacaagtgaacttctgtaccctgatgccaatgcgttcgattccatttagaacggtc
tgtctgctcggaatgaatgatggcgtgtatccgcgttccatgccgccggaaggttttgac
ttgatgacgggtagaaccaagccgggtgaccgttcacgacgagatgatgaccgctatcta
tttctcgaagcgatgctttccgcacagcaaacgctgtacatcagttatgtcggtcgttcg
attcaagacaacaccgagcgcgtaccgtcagtgctggtttctgagttgatggaatactgt
caccaaaattactgtttaggtggtgatgaaggtttactggttgatgattctggtgacaac
ttgttgaaagcgctggtcaatacgcatgccatggtgccgtttagcccaagtgcctttcag
gggatgcattccagctacgccaaagagtggattccggcggcgttaacccaaagtagccaa
tctcaaggctacgttcgtcatgactttaatcgcgcattggacgattatctgctgggagcc
acgttcccactagagcttgatttagtcgagctgcaacgtttctggcgtttaccggtacag
tacttttttaatcgccgattaaaagtggtatttgagccaccattgccagtcatggaagac
gatgagccatttgtactcggtggcctggaaagctatcaaatgcgtgatgagctattagaa
accttgctcgaaaccacgttgatgcaaccagaaaagaaaacagatgtgcttaagcacttt
atgagtcaacaacgtgcgcaaggtaagttaccagtcggtgcgtttggtgatatcgagttt
gaaaccaaccgagttcaggctgaagagctggtggacaaactggcgtttttatctggcgca
ccacaagatgatttagaaatcgatctgacctttgacgcgttattcgaaggcaatgaaggc
gatgagaaaaaagttcgcctgactggctggcttactcagtgttaccaatccggattgatt
cgctaccgaagtggcagggtgcgatcgcaggattatctggcagcttggattgatcacctt
gccatgtcagcctctggccatgccaagaaaacccatattattggctatgaccgcaaagaa
ggtgcggttcatttaatctacccggaaattgctgatgcatcgtatgccaagcaattactt
acggaattggttcgtctgttcttcgaaggtatgactaagcctttgccctatttcccccaa
accgctttggcatgtgttgaagctggctttagtcgtggacagtgggctgacgacgaagag
aaatctttaaagaaaatggcagatacattcaatgatggctacatgagcacgggtgagggc
aataacgcttatattgcgcgaatttggtctgcgtggagtgataacttagccacagaagta
cgcttgttaacggcgttggttctgcaaggcgctcgattagtcgtgcaagatgcagatgat
ataaaagaataa
DBGET
integrated database retrieval system
