Vibrio sp. STUT-A11: VspSTUT11_07140
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Entry
VspSTUT11_07140 CDS
T10419
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vib Vibrio sp. STUT-A11
Pathway
vib02020
Two-component system
vib02040
Flagellar assembly
vib05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VspSTUT11_07140
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VspSTUT11_07140
09142 Cell motility
02040 Flagellar assembly
VspSTUT11_07140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vib02022
]
VspSTUT11_07140
02035 Bacterial motility proteins [BR:
vib02035
]
VspSTUT11_07140
Two-component system [BR:
vib02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
VspSTUT11_07140
Bacterial motility proteins [BR:
vib02035
]
Flagellar system
Flagellar assembly proteins
Others
VspSTUT11_07140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_16
AAA_2
Mg_chelatase
MCM
HTH_20
AAA_19
MerR
HTH_24
AAA_7
AAA_3
FleQ
HTH_Crp_2
AAA
HTH_11
DUF2089
HTH_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BDR12738
LinkDB
All DBs
Position
1:854010..855419
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AA seq
469 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWLEAGCAEEALVKLKSNTVDIVVSDVQMAGM
GGLALLKNIKQNWPNLPVLLMTAYANIEDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP
IKSDDSGDAVVADEKSLRLLALADRVARTDANVMILGPSGSGKEVMSRYIHNASSRKDGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVSEGNFREDLYYRLNVFPIAWPAL
CERKGDIEPLAKHLAERHCGKMGMPVPKLSASAVDKLLNYPWPGNVRELDNVVQRALILS
ENGDIDGEHILLEGVDWQDANSLQRVVQNAQTLVPDVKPVAQAESISRIASGGEGLGSEL
RDQEYAIILDTLVECNGRRKDMADKLGISPRTLRYKLAKMRDAGIDIPN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagcaaagtgctgatcgtagaagatgacgaaggtcttcgtgaggccctggtg
gatactctggctctagcaggctatgagtggttagaagcgggctgtgcagaagaagcactg
gtcaagctgaaatcaaacacggtagatattgttgtctctgatgtgcaaatggctggtatg
ggcggtttagccctgctaaaaaacatcaaacagaactggccaaacctacctgttttgctg
atgacagcgtacgccaatattgaagatgcggtctcagcgatgaaagacggtgcgatagat
tacatggcaaaaccattcgcacctgaagtgttacttaatatggtcagtcgctacgcgccg
atcaaaagcgacgatagtggcgatgctgtggtcgccgacgaaaaaagcctgcgactgtta
gctctggcagaccgagtggcgcgtaccgacgccaacgtgatgatcctcggcccaagtggc
tcaggtaaagaagtcatgtcgcgctacatccataatgcctcaagccgtaaggatggtcct
tttgttgccatcaactgcgctgccattccagataacatgcttgaagccacgctatttggc
tacgaaaaaggcgcttttactggggctgttcaagcgtgtccgggtaaattcgaacaagcg
caaggcgggacgattttgttggatgaaatcagcgaaatggacctgaaccttcaggccaaa
ttgctgcgtgtgctgcaagagcgtgaagtcgagcgtttaggcagccgcaaaagcatcaag
ctggatgttcgtgttttggcgaccagtaaccgcgatctcaaacaatatgtgtcggaaggt
aacttccgtgaagatttatattaccgccttaacgttttcccaattgcatggccggcgctg
tgtgagcgtaaaggggatattgagccactagccaaacatcttgcggagcgccattgcgga
aagatggggatgccagttccgaagctttcggcgtctgcggtcgataaactgcttaattat
ccttggccgggtaacgttcgcgagttagataacgtcgttcagcgcgctctgattctgagt
gaaaatggcgacattgatggtgaacatattttgctcgaaggagtcgattggcaagatgcg
aatagcttgcagcgtgtggtgcaaaatgcacaaaccttggtgccggacgtgaagcctgtt
gctcaggctgagagcataagccgcattgcgtctggcggtgaaggtttggggagtgagtta
cgcgaccaagagtatgcgatcattctcgatactttggttgagtgtaatggtcgtcgaaaa
gacatggcagacaaactcggtatcagtccacgcacgttacgctacaaactggctaagatg
cgcgatgctggcatcgacattcccaattaa
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