Vibrio sp. STUT-A11: VspSTUT11_07920
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Entry
VspSTUT11_07920 CDS
T10419
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib03030
DNA replication
vib03430
Mismatch repair
vib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VspSTUT11_07920
03430 Mismatch repair
VspSTUT11_07920
03440 Homologous recombination
VspSTUT11_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vib03032
]
VspSTUT11_07920
03400 DNA repair and recombination proteins [BR:
vib03400
]
VspSTUT11_07920
Enzymes [BR:
vib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VspSTUT11_07920
DNA replication proteins [BR:
vib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VspSTUT11_07920
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VspSTUT11_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
ResIII
UPF0181
AAA_2
AAA_18
AAA_30
AAA_assoc_2
PIF1
Motif
Other DBs
NCBI-ProteinID:
BDR12816
LinkDB
All DBs
Position
1:938905..941049
Genome browser
AA seq
714 aa
AA seq
DB search
MSYLALARKWRPNKFDQVVGQKHVLTALENALAQNRLHHAYLFSGTRGVGKTSIGRLFAK
GLNCETGITATPCGQCDTCREIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
DEIHQQLDYILEQEQVSAEPKALGMISHAADGSMRDALSLTDQAIALGNGAVESGIVSHM
LGTIDTDQAIHLLDSISSKQPQQAIEKIQQLASNGVEWDGLLQQLAAQLHRIAMYQALPS
TLDQAQPDAEKIELLSKALSPQDVQLYYQVVIKGREDLSLSPNGRVGMEMIVLRMMAFRP
SASNSANVISTATQPQSAPIQNVSQQKVQKTATPQTSVQPPPSRPSPVSSQQPVNQPVVN
NQAPMQDGSQLQPDYQPAEYETPAQYDIAPPMSENPAPQNQESPQQASERASATPARGGL
SGLRHQLRSQRQGLQQNAPQQSGGPKKPKATSAKPESVLDRVAQRHGSSAQVSPSSTPQT
EEPVVEEAYRWRPSKPAETKVNTKLTPTQLKQALEHEKTPEMAQKLVDESLEQNEWAKLI
SLMNMPKLVEQLALNSHYNKEGSTVSLQLRSAQAHLNTDRAQGELLNALNTLLGEDCHLT
VEISDAGETPLELRDRLYQEKLQQALNSLENDPNVHFIERRFAAELVKDSVRPI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttagctttagcgcgaaaatggcgtcctaataagtttgaccaggtcgtggga
caaaaacatgttctcacggcattggaaaatgcgttagcgcaaaatcgcctccatcatgcg
tatttgtttagtggtactcgtggtgttggtaagacgagtatcggccgtttgttcgccaaa
gggctgaactgtgaaaccggaattaccgcaacaccttgtggtcagtgcgatacttgtcgc
gaaattgatgaggggcgatttgttgacctgctagaaattgatgcagcctcacgcactaaa
gttgaagacactcgagaactgttagacaacgttcaatataaacctgctcgcggacgcttt
aaggtgtatctcatcgatgaggtacatatgttgtcacgtcactccttcaatgctctgttg
aaaacattggaagaaccgccggaatacgttaagttcttactggcgaccacggatccgcaa
aagctacccgtgacgattttgtcacgttgtctgcagttccacttaaagccaatcagtgtc
gatgagattcatcagcagctagattatatccttgagcaagaacaggtctcagcagaaccg
aaagcgttgggtatgatctctcacgcggccgatggcagtatgcgtgatgctctgagtttg
actgatcaagcgattgctctgggtaatggtgcagtagaatctggcatcgttagccatatg
ctaggcaccattgatactgatcaggctattcacttacttgattcgatcagtagcaaacag
ccccaacaagcgatagaaaaaatccaacaattggcgtcaaatggcgtggagtgggatggc
ttattgcaacagttggcagcccaattacaccgaattgctatgtatcaggctttgccatct
acgttagatcaagctcagcctgatgcagaaaaaatcgagttattaagtaaagcgctcagc
ccacaagatgtgcagctttattatcaggttgtgataaaaggtcgtgaagatctctcgttg
tcaccaaacggccgagtcggcatggaaatgatcgtattgcgcatgatggcatttcgcccg
tcagcaagtaatagtgcaaatgtcatttctactgcaacgcaaccgcaatctgcgcctata
cagaacgtgagtcagcaaaaagtacagaagactgcaactccgcagacttcggttcaacca
ccgccgtcacgaccgtcgccagtgtcatcacagcagcctgtaaatcaaccagtggtcaac
aaccaggctccgatgcaagatgggtctcagctccagcctgactatcaaccagccgagtac
gagacaccggcgcaatatgacatagcgccaccaatgagtgagaacccagcgcctcagaat
caggaatcgcctcaacaagcctcagagcgtgcttcagcaacacctgctcgtggtgggtta
agtggcttgcgccatcaactccgctctcagcgtcagggtttacaacaaaatgccccgcag
caaagtggtggtccaaaaaagcctaaagcgacatctgccaaaccagagtcggttcttgat
cgtgtcgcgcaaagacacggcagttccgcgcaggtgtcgccaagctcaacgcctcaaacg
gaagagccagtcgttgaagaagcgtatcgctggcgtccgagcaaaccagctgagacaaaa
gtcaataccaaactgacacctacgcagctcaagcaagcgcttgagcatgagaaaacacct
gaaatggcgcaaaagctcgtcgatgagtctctagagcaaaatgagtgggcaaaactcatc
agcctgatgaacatgcctaagctagtggagcaacttgcgctaaactcacattataacaaa
gaaggttcgacggtttctttgcagctgagaagtgctcaggcacacttaaatacagataga
gcacaaggcgaattactcaacgctctcaatacgcttttaggtgaagattgccatttaact
gtagaaattagtgatgctggtgagacaccgttagaattgcgagatcgactctatcaagaa
aaattgcaacaagctttgaatagcctggaaaacgatccaaacgttcattttatcgaacgt
cgatttgccgcagagcttgtgaaagatagtgtgcgccctatctaa
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