Vibrio sp. STUT-A11: VspSTUT11_17120
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Entry
VspSTUT11_17120 CDS
T10419
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vib02000
]
VspSTUT11_17120
Transporters [BR:
vib02000
]
Other transporters
Pores ion channels [TC:
1
]
VspSTUT11_17120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
DUF2490
DUF481
PagL
Porin_4
Autotransporter
BBP2
Motif
Other DBs
NCBI-ProteinID:
BDR13736
LinkDB
All DBs
Position
1:complement(1945453..1946430)
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AA seq
325 aa
AA seq
DB search
MVTPLNTKKLMILVSLFATQAMATEANKPTDTFYFGVKGGYQVLDDDKSHASSPDGTKLG
VYGGVRLSDNLSWDLGYQNWESTKFDAHKIDVDMIESALRYDAYINEKVSLYGRAGIGYA
FVDAASAQGDKDYDGVSSLAEVGINYWLSDKLSTGLSYQYIRAVGGHDDLDLDSNSLNLS
LTYNFTNRFKYETVEVVTQEPIATAVTVIELQDSTLFGFDSFELTSAGKEHLLNIIGQIP
EQSTAVFNIVGHTDSSGPEEYNMKLSERRAQAVKDFLVQSGLADVSITVEGKGETQPIAS
NDSLQGRMNNRRVEITVDYRMSRAQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtgactccattgaatacaaaaaaattaatgattcttgtgtctttgtttgcaacacaa
gccatggcaacagaagcaaataaaccgactgacaccttctattttggtgtaaaaggcggc
taccaagtactggatgatgacaagtctcacgccagcagtccagacggcactaaattgggc
gtgtatggtggggttcgcctcagtgataacctaagctgggacttgggttaccagaactgg
gaaagcacaaagttcgatgcgcataaaatagacgtagacatgattgaaagtgcgttgcgt
tacgacgcgtacattaatgaaaaagtcagcttgtatggacgcgctggtattgggtacgcc
ttcgtggatgctgcgtcagcacaaggcgataaagattatgacggtgtctcatcactggcg
gaagtcggcatcaactactggttgagcgacaagctttctacgggcttaagttaccagtac
attcgtgcggtagggggccatgatgacttggacttggactcgaacagtcttaacctgtcg
ctgacctataacttcactaaccgctttaagtacgaaacggttgaggtagtcacacaggag
ccaatagcgacagcggttacggtgattgaattacaagactcaaccttgtttggatttgac
agctttgaactgacatcagcgggtaaagaacatttgttgaatattattggccaaattcct
gaacagtctactgcggtgttcaacattgtcggacatactgattcgtcaggaccagaagaa
tataatatgaagttgtctgaaagacgcgcccaagcggtgaaagacttccttgtccagtct
ggtttggcagacgtgagcattacggtagaaggtaaaggcgaaactcaacctattgcaagt
aatgatagcctacaaggtagaatgaataatcgacgggttgaaattacagtagattaccga
atgtctcgggctcaataa
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integrated database retrieval system
