Vibrio sp. STUT-A11: VspSTUT11_19290
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Entry
VspSTUT11_19290 CDS
T10419
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VspSTUT11_19290 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vib01007
]
VspSTUT11_19290 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vib03016
]
VspSTUT11_19290 (serS)
Enzymes [BR:
vib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
VspSTUT11_19290 (serS)
Amino acid related enzymes [BR:
vib01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VspSTUT11_19290 (serS)
Transfer RNA biogenesis [BR:
vib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VspSTUT11_19290 (serS)
Prokaryotic type
VspSTUT11_19290 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Spectrin
TMF_TATA_bd
YGR130C_N
CEP83_CC_1st
HH_RND_rel
ERM_helical
DUF3086
PCRF
FapA
ODF2_C
HH_YknX
Motif
Other DBs
NCBI-ProteinID:
BDR13953
LinkDB
All DBs
Position
1:complement(2173456..2174763)
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AA seq
435 aa
AA seq
DB search
MLDSKLLRTELDETAAKLARRGFKLDVETIRNLEEQRKSIQVEVENLQSTRNSISKQIGQ
KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELDAVMAQLEEITLSVPNLPADDVPDGKDED
DNVEISRWGEPKTYDFELKDHVDLGEMGDGLDFASATKITGARFIVMKGQFARLHRAIAQ
FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLEEKVNDEEPRRLSLI
PTAEVPVTNMVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TKPEDSMDALEELTGHAEKVLQILELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI
PTALQKYMGGATHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgaactgagctggatgaaacagctgctaaactggcacgt
cgtggctttaagctagacgtcgagactatccgtaaccttgaagaacaacgcaagtccatt
caagtagaagttgaaaatttacaatccacgcgtaactccatctccaagcaaatcggccaa
aaaatggcagctggcgacaaagaaggcgcagaagagatcaagaaacaaatcggtacacta
ggtagcgatcttgatgcgaaaaaagtggaacttgacgccgtaatggctcaacttgaagag
atcactctatctgttccaaacctgccagctgacgatgtgccagacggcaaagatgaagac
gacaacgtagagatctctcgttggggcgagccaaaaacctacgatttcgaactgaaagat
cacgttgacctaggtgaaatgggcgatggcctagatttcgcgagcgcgactaaaattacc
ggtgcacgctttatcgtaatgaaaggtcaattcgcgcgcctacaccgtgcaatcgctcag
tttatgctagatcttcataccgaagaacacggctacacagaaatgtacgtaccgtaccta
gtgaattctgacagcctatttggtacgggtcagctacctaaatttggtaaagaccttttc
cacacagagccacttgaagagaaagtgaacgacgaagagccgcgtagactatcgcttatc
ccaaccgctgaagtaccagtaaccaacatggtacgtgacacgatttctgacgaagctgat
ttgccacttaagatgacagctcacacaccgtgtttccgttcagaagcaggttcttacggt
cgtgatactcgtggtctgattcgtatgcaccagtttgacaaagttgaactagtacaaatc
accaagccagaagactcaatggatgcacttgaagagctgactggtcacgctgagaaagtg
ctgcaaattctggaacttccttaccgtaaagtggttctatgtactggtgacatgggcttc
ggcgcacgtaagacttacgatttggaagtgtgggttcctgctcaagaaacttaccgtgaa
atctcttcatgttctaacatgtgggatttccaggctcgtcgtatgcaagcgcgtttccgt
cgtaaaggcgagaagaaacctgagcttgtgcacacgctaaacggttctggtctggcagtt
ggtcgtactatggttgctattcttgagaacaaccaggaagccgatggtcgcattgctatc
ccaacagcacttcaaaagtacatgggcggtgcaacgcacatcggttaa
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