Vibrio sp. STUT-A11: VspSTUT11_19730
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Entry
VspSTUT11_19730 CDS
T10419
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VspSTUT11_19730 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vib03400
]
VspSTUT11_19730 (ruvB)
Enzymes [BR:
vib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VspSTUT11_19730 (ruvB)
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VspSTUT11_19730 (ruvB)
RecFOR pathway proteins
VspSTUT11_19730 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_14
AAA_22
AAA_3
nSTAND3
AAA_16
Rad17
NTPase_1
Bac_DnaA
RNA_helicase
AAA_18
ABC_tran
NB-ARC
DUF815
Sigma54_activ_2
AAA_24
TIP49
AAA_17
AAA_28
NPHP3_N
bpMoxR
AAA_PrkA
TsaE
ATP-synt_ab
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BDR13997
LinkDB
All DBs
Position
1:complement(2223656..2224660)
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AA seq
334 aa
AA seq
DB search
MIEADRLIAPENPAFREEDVIDRAIRPKKLEDYQGQDHVRGQMEIFIKAAQLRNEALDHL
LIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIT
QRLEFYKIKDLQDIVQRSADCLGLSMEPEGALEVARRARGTPRIANRLLRRVRDYAEVKG
NGHICADVADKALNMLDVDAQGFDYMDRKLLLAIMEKFGGGPVGLDNMAAAIGEEKDTIE
DVLEPYLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgatcgtttaatcgctccagaaaacccggcgtttagggaagaagacgtc
attgaccgtgcaatccgcccgaaaaagctagaagactaccaaggtcaggatcacgttcga
ggccagatggagatctttatcaaagcggcgcaactgcgtaatgaagcgttagatcatctg
ctgatttttggtcctccgggcttgggtaaaaccacactcgccaatatcgttgcgaatgaa
atggaagttaacattcgtaccacatcaggccctgtgttagaaaaggcaggggatttagcc
gcgctgctcaccaacttagaagaaaacgatgttctctttattgacgagattcaccgccta
agcccaatggttgaagaggtgctttatcctgcgatggaagattaccagttggatatcatg
attggtgaaggacctgctgcacgttcaattaaaatcgatcttccgccgtttaccttaatt
ggtgcgacgacacgcgctggctcgttgacgtcaccattacgcgaccgttttggtatcact
cagcgccttgagttttataaaattaaagacctacaggacatcgtccagcgtagtgcggat
tgtttaggtctctctatggagccggaaggggctttagaggttgcacgtcgtgctcgtggt
acgcctcgtattgcaaaccgtttattacgtcgtgtgcgtgattatgcggaagtaaaaggc
aatggccacatctgtgctgatgtcgctgacaaagcgcttaacatgcttgatgttgatgct
cagggctttgactatatggaccgtaaactgcttctggcgattatggagaagtttggcggt
ggtccggttggcctcgataacatggcagcggctatcggtgaagaaaaagacacgatagaa
gacgtgttggaaccttatctgattcaacaaggttatttacaacgaacaccacgggggaga
attgccactgatcgggcttatcttcactttggaatcgaaaagtag
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