Vibrio sp. STUT-A11: VspSTUT11_22550
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Entry
VspSTUT11_22550 CDS
T10419
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00541
Biosynthesis of various nucleotide sugars
vib01100
Metabolic pathways
vib01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VspSTUT11_22550 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vib01005
]
VspSTUT11_22550 (kdsA)
Enzymes [BR:
vib01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VspSTUT11_22550 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vib01005
]
Lipid A
VspSTUT11_22550 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDR14279
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Position
1:complement(2549812..2550663)
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AA seq
283 aa
AA seq
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MEQKIVNIGDIQVANDKPFTLFAGMNVLESRDLAMQICEHYVKVTEKLGIPYVFKASFDK
ANRSSVHSYRGPGLEEGMKIFQELKDTFGVKIITDVHTEAQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAECGNDKIILCERGSCHGYDNLVVD
MLGFGVMKNASKGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPTPDQARCDGPSALPLDKLEPFLAQMKSLDDLIKSFADIDIK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaaatcgttaatatcggcgacattcaggttgctaacgacaagccattcacc
ctatttgcaggtatgaacgttcttgagtctcgtgatcttgccatgcagatctgtgagcac
tacgtaaaagttactgaaaaattaggtattccttacgtatttaaggcgtcgttcgacaaa
gcaaaccgcagttctgttcactcataccgtggccctggccttgaagaaggtatgaagatc
tttcaagagcttaaagacacctttggcgtgaaaatcatcacggatgttcacactgaagct
caggcacagccagtcgcagacgttgtggatgttattcagcttcctgcgttcctagcacgt
caaactgaccttgttgaagcgatggcgaaaacaggcgcagtgatcaacgtgaaaaaacct
cagttcatgagtcctggtcaggtaggtaacatcgttgagaagtttgcagagtgtggtaac
gataaaatcatcctttgtgagcgcggatcttgccatggctacgataacttagtagttgat
atgcttggctttggcgtaatgaagaacgcatcaaaaggcagtccaatcatttttgacgta
acgcactcactacaaatgcgtgacccgtcaggtgcggcatcgggcggtcgccgtgaacag
acggttgaattggcaaaagcaggccttgcaacgggtattgctggtttgttcattgaagcg
cacccgaccccagatcaagctcgttgtgatggcccttctgcgttaccactggacaagcta
gaaccattcctggcgcaaatgaagtctctggacgatctgattaagagctttgcggacatc
gacattaaataa
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