Vibrio sp. STUT-A11: VspSTUT11_22860
Help
Entry
VspSTUT11_22860 CDS
T10419
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00260
Glycine, serine and threonine metabolism
vib00460
Cyanoamino acid metabolism
vib00630
Glyoxylate and dicarboxylate metabolism
vib00670
One carbon pool by folate
vib00680
Methane metabolism
vib01100
Metabolic pathways
vib01110
Biosynthesis of secondary metabolites
vib01120
Microbial metabolism in diverse environments
vib01200
Carbon metabolism
vib01230
Biosynthesis of amino acids
vib01240
Biosynthesis of cofactors
vib04981
Folate transport and metabolism
Module
vib_M00140
C1-unit interconversion, prokaryotes
vib_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VspSTUT11_22860 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
VspSTUT11_22860 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VspSTUT11_22860 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VspSTUT11_22860 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VspSTUT11_22860 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VspSTUT11_22860 (glyA1)
Enzymes [BR:
vib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VspSTUT11_22860 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BDR14310
LinkDB
All DBs
Position
1:complement(2583896..2585146)
Genome browser
AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACELFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALAIEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGVYPTPVPYAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVENAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTVEDAKELANWMCDVLDSIDNQEVIEATKQKVLDICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcagaacaactagcaatcgat
cgcgcgtgcgaattattcggttgtgaatacgcaaacgtacagcctcactcaggttctcaa
gcaaacagcgcagtatacatggcgctgcttaacccgggcgacacagtactaggcatgagc
ctggcacacggtggtcacctgactcacggttctccagtaaacttctctggtaagcactat
aacgttatcccttacggtatcgacgaagctggtcaaatcaactacgacgagatggaagcg
cttgcgattgagcacaagcctaagatgatcatcggtggtttctctgcttactctcaaatc
gttgactggaaacgcatgcgtgaaatcgcagacaaagtggatgcttacctattcgtagat
atggctcacgttgctggtcttatcgcggcaggtgtttacccaacaccagtaccatacgca
cacgttgtaacgacaacgacgcacaaaacactagcaggtccacgtggtggccttatcctg
tctaacgctggcgaagacatgtacaaaaagctgaactcagctgtcttccctggtggtcaa
ggtggtcctctaatgcacgtgatcgctggtaaagcggtagcgttcaaagaagcaatggag
cctgaatttaaagcataccaagctcgcgttgtagaaaacgcgaaagcaatggttgctcag
ttccaagagcgtggttacaaaatcgtttctaacggtacagaaaatcatctgttcctggtt
gatctaatcgacaagaacattactggtaaagaagcggatgcagcactaggcgcagcgaac
atcacagtaaacaaaaactcagtaccaaatgacccacgtagcccattcgtaacgtctggt
atccgtgttggtacgccagcaatcactcgccgtggcttcacagtagaagacgcaaaagag
cttgcgaactggatgtgtgacgttcttgatagcatcgacaaccaagaagttatcgaagca
acaaaacagaaagtgctagatatttgtaagcgtctaccagtttacgcataa
DBGET
integrated database retrieval system
