Vibrio sp. STUT-A11: VspSTUT11_24560
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Entry
VspSTUT11_24560 CDS
T10419
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vib03110
]
VspSTUT11_24560 (clpB)
Chaperones and folding catalysts [BR:
vib03110
]
Heat shock proteins
HSP100
VspSTUT11_24560 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
ATPase_2
AAA_14
TniB
AAA_18
AAA_24
IstB_IS21
bpMoxR
AAA_7
NBD_SMAX1
DUF815
AAA_19
Zeta_toxin
NACHT
RHH_3
Motif
Other DBs
NCBI-ProteinID:
BDR14480
LinkDB
All DBs
Position
1:complement(2781942..2784515)
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLDVDVTHL
RSKLSEILDRLPKVSGIGGDVQLSGAMGTLFNLCDKVAQKRQDSYISSEIFLLAAIEDKG
PLGQLLKEVGLTEQKVSQAIEKIRGGQKVDDPNAEELRQALEKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLAL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELH
HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKII
QLKIEQQALSNEHDEASEKRLTTLNEELTEKEREYAELEEVWNTEKAALSGTQHIKSELE
QARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDNEIAEVL
SKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSSRIQENFAILDYQGIKNEVMEVVSKHFRPEFLNRVDETVVFHPLGKEHIKSIASIQLE
RLHKRLAEKDYELEVGDEALELIAQVGFDPVYGARPLKRAIQQNVENPLAKSILSGQFLP
GKPIVLGVDDGNIVASQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgatagattcacaagtaagtttcaaatcgctatctctgatgctcaatcatta
gcgttggggcgcgatcatcaatatatagagccagttcacctgatggtggctttgcttgat
caaaatggcagtccaattcgtccgttgctgacaatgttggatgtggacgtgacacatttg
cgctctaagttgagcgaaatccttgatcgattaccaaaagtcagcggtattggtggagat
gtgcagctttcgggtgcgatgggtactctgttcaatctttgtgacaaagtcgcgcaaaaa
cgccaggactcttatatttcgtctgaaatcttcctcctagccgccattgaggacaaaggt
ccgcttggtcaattattgaaagaagtcggtttaaccgagcagaaagtaagccaggcgatc
gaaaagatcagaggtggtcaaaaggtcgatgatccgaatgccgaagaacttcgtcaggct
ttggaaaagttcaccatagaccttaccgaaagagcagagcagggtaagttggatccagtg
attggccgcgatgatgaaatccgccgtacgattcaagttctgcaacgccgtactaaaaat
aacccggttatcattggtgaacctggtgtgggtaaaacagcgatcgttgaaggtttggca
cagcgtattattaataatgaagtgccagaaggtttgcgtggtcgtcgcgtgcttgccttg
gatatgggagcgttggttgcgggtgctaagtaccgaggtgagttcgaagagcgcttgaaa
tcagtattgaatgagttagctaaagaagaaggcaacatcattctgtttattgatgagcta
cataccatggtgggcgctggtaaaggtgaaggttctatggatgcgggtaacatgctgaaa
ccagcattggctcgtggtgaacttcactgtgttggtgcgacaacattggacgaataccga
aagtacattgagaaagacgcggcattagagcgtcgtttccaaaaagtgctggtggatgag
ccaaccgttgaagatacggtcgccattttacgtggtttgaaagagcgttatgagctgcat
caccatgtagaaattactgatccggctatcgttgcggcagcaagtttgtcacatcgatat
atttccgatcgtcaattacctgataaagcgatcgacttgatcgacgaagcggcatcaagt
attcgtctgcaaatcgactcgaaacctgaatcgttggataagcttgagcgtaaaatcatt
cagttaaagattgagcagcaagcgttaagtaatgagcatgatgaagcgagtgaaaagcgc
ctgacgactttaaatgaagagttgactgagaaagagcgcgaatatgctgagttagaagag
gtatggaatacagaaaaagccgcactatcgggtacgcaacacattaaatccgagcttgag
caagcacggatggatatggagtttgctcgccgtgcgggtgatctaaaccgtatgtcagag
ttgcaatatggccgtattcctgagctggaaaaacaactggacttggctgcgcaagcagaa
atgcaagagatgacgttgttgcgtaacaaagttactgataacgaaatcgcggaagtgctg
tccaaacaaacgggcattccggtctcgaagatgctcgaagcagagaaagaaaaactgctt
cgcatggaagaggtgttacacaagcgtgtgattggccaggtggaagcggttgaagtggtt
gcgaatgcgattcgccgtagccgtgccgggttgtcggatccaaaccgaccaattggctca
ttcttgttcttaggcccgactggtgtcggtaaaactgagttgtgtaagacactggcaaac
tttatgtttgatagcgaagacgcaatggtgcgtattgatatgtctgagtttatggagaaa
cactctgtagcgagactggttggtgcgcctccgggttacgttggctatgaagagggtggt
tatctgactgaagcggttcgtcgcaaaccttattcggtaattctattggatgaggtagaa
aaagcgcacccagatgtgttcaacattctgcttcaagtgttggatgacgggcgtctgact
gatggccagggtcgtacggttgatttccgtaatacggtggtgatcatgacctcaaactta
ggctcttcgagaattcaggaaaacttcgcaatactggattatcaaggcattaagaatgaa
gtcatggaggtggtcagcaaacacttccgtcctgagttcttgaaccgtgttgatgaaacc
gtggtattccatccacttggtaaagagcacattaagtcaattgcttctattcagttggaa
cgtctgcataaacgtctggctgagaaagactatgaactagaagtcggcgacgaggcgtta
gagttgattgctcaagttggctttgaccctgtatatggtgcgcgtccattgaaacgtgca
attcaacaaaatgttgaaaacccattagccaagtcgattctttctggtcagttcttacca
ggaaaaccgattgtactgggtgttgacgacggcaatatcgtcgctagccaatag
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