Vibrio sp. STUT-A11: VspSTUT11_25130
Help
Entry
VspSTUT11_25130 CDS
T10419
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VspSTUT11_25130 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vib03400
]
VspSTUT11_25130 (nfo)
Enzymes [BR:
vib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VspSTUT11_25130 (nfo)
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VspSTUT11_25130 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BDR14537
LinkDB
All DBs
Position
1:complement(2848080..2848967)
Genome browser
AA seq
295 aa
AA seq
DB search
MTNMKNKFGSKLIGAHVSTAGGVDQAPLRAREIGANAFALFTKNQRQWVAKPLEEKTISA
FKANCKMLGFSSDSILPHDSYLINLGAPEEEKLNKSRAAFIDEMERCNQLGLTLLNFHPG
SHLKKVSEQACLATIAESINLAHKAVPNVIAVIENTAGQGTNLGWKFEHLAEIIEQVEDK
ERVGVCIDTCHTFTAGYDLRTKEDCERTFSEFDRIVGMHYLRAMHLNDSKVEFASRVDRH
HSLGKGEIGWDCFEYIARDARFDGIPLILETIDPDIWHQEIETLRDYHLQELNKN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatgaaaaacaagtttggaagtaaactgatcggtgctcatgtttctaccgct
ggaggcgtagatcaggcccctttgcgtgcacgtgagataggcgccaacgcttttgcttta
tttaccaaaaaccagcgtcagtgggtagccaagccactggaagagaaaaccattagtgca
tttaaagccaactgcaaaatgctcgggtttagctctgatagtattttgccgcatgactcg
tatctgattaatttaggtgcgcctgaagaagagaaactcaataagtcacgcgccgcattc
attgatgaaatggagcgttgtaatcagcttggtctaacgctgttaaactttcatcccgga
agtcacctgaaaaaagtctccgagcaggcgtgtttagcgacgattgcggagtcaatcaat
cttgcacacaaagcagtaccaaacgtgattgcggttatcgagaacacggcgggccagggt
accaacctgggctggaagtttgaacaccttgcagaaatcatcgagcaagtagaagacaaa
gagcgtgtcggtgtgtgcattgatacctgtcatacgtttaccgcaggctatgatttaaga
acgaaagaagattgcgaacgcacgttttctgagttcgatcgtatcgttggtatgcactat
ttaagggcgatgcatctaaatgattcaaaagtagagtttgcaagccgggttgatcgccat
cactctctggggaaaggtgaaatcggctgggactgttttgaatatatagcaagagacgcc
cgttttgatggtatccctttgattttggaaacaattgatccggatatttggcatcaagaa
atagagacgcttcgtgactaccatttgcaagaattaaacaaaaattaa
DBGET
integrated database retrieval system
