Vibrio sp. STUT-A11: VspSTUT11_25480
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Entry
VspSTUT11_25480 CDS
T10419
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00470
D-Amino acid metabolism
vib00550
Peptidoglycan biosynthesis
vib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VspSTUT11_25480 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VspSTUT11_25480 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vib01011
]
VspSTUT11_25480 (murD)
Enzymes [BR:
vib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VspSTUT11_25480 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vib01011
]
Precursor biosynthesis
Amino acid ligase
VspSTUT11_25480 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
Thi4
TrkA_N
DAO
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BDR14572
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All DBs
Position
1:complement(2898032..2899345)
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AA seq
437 aa
AA seq
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MERWQNIHNVVVVGLGITGLSVVKHLRKNQPQLVVKVIDTRANPPGADRLPEGIELHSGG
WNTTWLTEADLVVTNPGIALATPEIQSVLGRGTPVVGDIELFAWAVSKPVVAITGSNGKS
TVTDLTGVMAKAAGLNVGVGGNIGVPALDLLEQEADLYVLELSSFQLETTSSLKLTAAAF
LNLSEDHMDRYASMADYRSAKLRIFNHAELAVVNRDDQETLPDHAMPVVTFGGDEQAFGL
DTDGEKTWLLDHGQRVIASDELKLVGKHNLANVLVVLALLKATGIDYHNTLNTLKNYTGL
THRCQVVEDNQGVKWVNDSKATNIASTMAALSGLELTGKLYLLVGGVGKGADFTPLEPIF
ATLNLQLCCFGKDGDEFLPLHESAIRFNTMEDVIQQISSQLKAGDMVMLSPACASFDQFD
NFMARGDAFAALAKKYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttggcaaaacatacataatgttgtcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctaagaaaaaatcagccacaactagtggttaaagtcattgatacc
cgagctaatcctccgggggctgaccgccttcctgaagggattgagctgcatagcggtggt
tggaataccacgtggcttacagaggctgatctggttgtgaccaaccctggcatcgcgctt
gcgacgcctgaaattcagtccgtactaggtcgcgggacacccgttgtcggggatattgaa
ctgtttgcctgggcagtcagtaagcctgttgttgcgattaccggctctaatggtaagagt
acggtcacggacttaaccggagtaatggcaaaagcggcgggtttgaatgttggtgtgggc
ggcaatattggcgttcctgcgctcgatctactcgaacaagaggcggacctatatgtgctg
gaactgtctagcttccagctggaaaccacgtccagccttaagttaactgcggcggcgttt
ctgaatctttcagaagatcatatggatcgctatgcaagcatggccgactaccgatctgca
aaattgcgtattttcaatcatgctgagcttgcggttgtcaatcgagatgatcaggaaacc
ttgcctgatcatgccatgccagtggttacctttggcggcgatgagcaagcctttggttta
gataccgatggtgagaaaacctggttacttgatcacggccagcgcgtgattgccagtgat
gaacttaagctggtcggcaaacacaacttagcgaatgttctggtggtgttggctttgctc
aaagcgacaggtatcgactatcacaacacattgaatacacttaaaaattacaccggactg
acacaccgttgccaggttgttgaagataatcaaggtgttaaatgggtcaatgattccaag
gcaaccaatattgctagcacgatggcagcgttatcgggtctggaacttactggtaagttg
tatctactggttggtggcgttggtaaaggcgcagattttacccccttagaaccgatcttc
gcgacactcaatttacagttgtgctgctttggtaaagatggtgatgaattcttaccattg
catgagtcagcgattcgtttcaatacgatggaagatgtgattcagcaaatatcttcgcag
ttaaaagcgggtgatatggtgatgctgtctcctgcatgtgctagctttgatcaattcgac
aactttatggcaagaggtgatgcgttcgctgctcttgctaaaaaatacgcataa
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