Vibrio sp. STUT-A11: VspSTUT11_33080
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Entry
VspSTUT11_33080 CDS
T10419
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vib02000
]
VspSTUT11_33080
Transporters [BR:
vib02000
]
Other transporters
Pores ion channels [TC:
1
]
VspSTUT11_33080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OmpA_membrane
OMP_b-brl
DUF3187
DUF2490
Motif
Other DBs
NCBI-ProteinID:
BDR15332
LinkDB
All DBs
Position
2:complement(381220..382143)
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AA seq
307 aa
AA seq
DB search
MKLKAVTLAIMLAGGVSVANAANLDQNIDKSGFWLGAAGGMGLSDTDAGESEVLSPKLEM
GYDFGKHFGLYGSYDYMHNLSDAELHLGTLGMKGNLYFTDNLSMFGKLGATYIFADGSEL
KTDSFSGTAGVGLEYQLTNAVTTKIGYDYYNNLEAKNGHDLDLSQVYWGMTYKFGQPETP
LVVEEKVEVPVEVVKEVTQTSRSTYTLPYQVGQVDVNDYGRYNLDEVITTMRSNPELTAE
IVGRTDATGSAATNERVSTQRAEHVAQYMIDQGIDSQRITTTGVADQQPLTNGSNAQLER
SVQITLN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaagcagtgacgctagcaattatgttagctggtggtgtatcagtggcaaat
gctgcaaacctggatcaaaatatcgataaatctggattctggctgggcgcagctggtggt
atgggtctatctgatactgatgctggcgaaagcgaagtactcagccctaaacttgaaatg
ggctacgacttcggtaagcattttggtctctacggcagctacgattacatgcataaccta
agcgatgcagaactgcaccttggcactttaggtatgaaaggaaacctgtacttcactgac
aacttgtctatgttcggtaagcttggtgcaacctacatctttgcggatggtagcgaactg
aaaactgacagctttagcggtactgcaggtgtgggtcttgaataccaactgactaatgct
gtaacgacaaaaatcggttacgactactacaacaatcttgaagcgaaaaatggccatgac
cttgacctaagccaagtgtactggggtatgacgtacaaattcggccaacctgaaacgcct
ttagtcgttgaggaaaaagtggaagtgccagtagaagtcgtaaaagaagtgacgcaaact
tctcgttctacttacacactgccttaccaagtgggtcaggttgatgtcaatgactacggt
cgttacaaccttgatgaagtgatcacgacaatgcgcagcaaccctgagttgactgctgaa
atcgtaggccgtacggatgcgactggttctgctgctaccaatgaacgtgtttcaacgcag
cgtgcagagcatgttgcacaatacatgatcgatcaaggtatcgattcacaacgcatcact
actacaggcgttgcagaccaacagccattaacgaatggtagtaacgcacaacttgagcgc
tcggttcagatcacgttgaactaa
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