Vibrio sp. STUT-A11: VspSTUT11_34860
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Entry
VspSTUT11_34860 CDS
T10419
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vib02000
]
VspSTUT11_34860
Transporters [BR:
vib02000
]
Other transporters
Pores ion channels [TC:
1
]
VspSTUT11_34860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
BDR15510
LinkDB
All DBs
Position
2:599627..601708
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AA seq
693 aa
AA seq
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MFTKSHLALVIGAVLTAPAVAEIQTDEHLVVEGREFGYKADTNSTAMRMEMTQLETPGQV
AVIDETVIDEQRASTLGEVLRNDASVSAGGTSRNRERFSLRGFELSSSDGFLKDGRQHWS
HYRQPIELLERVEVLKGPSGLLYGKSEPGGLVNMVSKKPTAKTQVSLSQDIGSNEHSRTV
LDVSGSLNEAETLRARATLAKENYSSWRTYGDGTKPQTDRFVGGLVAEYDITENVMVSAH
YDRTKDEGSVDSGAYIVNGKPARGDKYIWDAQWSKIDNEVENYGVDINAQVTENVNVKAG
YNRQDFERFDVESYPKFNEYDAGNVIVHRGNDRSDNWVFDTAYLDVTTGFALFGTENTLL
VGANYLDYSYDRFMAFHNEAKIAPGETVPKPDYRSSRKWPTNEYDTWGIYAQNMMTINDY
WQVLAGVRYDEKRSDELTESQISPKFGVTFHPTPNGSIYVQYSESFMPQGQVNGDDYTND
GEELDAERGVSYEVGTKWELFDQRLYLTGALFDITLENVKLTVDAPNNPGKEAVTQDGEQ
VHRGAEILAQGFVTDKLSLTASAMYLDAEITQSKNYKGNRPADVPEFSASVWSSYKVQGN
TNLNLGLIYEGDRYGDAANTFEKDGYARIDMGVSYKHKYDENLDIIARFNVENLFDTEYL
AGGGSTDPLEYEGASGVVVGEGRNYMATIQFKY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaagagccatttggcgttagtgatcggtgcggtgttaacagcaccagcagtg
gcagaaattcaaacagatgaacacttagtcgttgaagggcgcgaattcggctacaaagcg
gataccaacagtacagcgatgcgcatggaaatgacgcagctagaaacaccgggacaagtt
gccgtcattgacgaaaccgtaatcgatgagcaacgtgcgagtacgctgggagaggtacta
cgcaatgatgcgagtgtgagcgctggtggtactagccgtaaccgtgagcgtttctcgcta
cgcggatttgaactaagtagctcggatggatttctaaaagatggtcgccaacactggtcg
cattatcgtcagccaattgagcttttagagcgcgttgaagtgttaaaaggtccatctggt
ctgctttatggtaagtctgagccgggtggcttggtcaacatggtttctaagaagccgaca
gcaaaaacacaggtgagcctgagccaagacatcggttcaaacgagcattcgcgtacagtg
cttgatgtaagtggctctttaaacgaagcggagacgttacgtgctcgcgcgactttagcg
aaggagaactacagttcttggcgcacatacggtgatggcacaaagcctcaaactgaccgt
tttgttggtggtttagttgctgagtatgacattaccgaaaacgttatggtgtcagcgcac
tatgaccgcacaaaagatgaaggtagcgtagactcaggtgcttacattgtgaatggtaag
ccggcgcgtggtgataaatacatttgggatgcgcagtggtcgaagatcgataacgaggtc
gaaaactacggcgtcgatattaacgctcaagtcactgagaacgttaatgtaaaagcggga
tataaccgccaggactttgagcgttttgacgtagagtcttacccgaagttcaatgaatac
gatgcaggtaatgtcattgttcatcgtggcaacgaccgttctgacaactgggtgtttgat
accgcctatttagacgtcacgacgggctttgctctgtttggtacagaaaacacactatta
gtcggcgctaactacttagattacagttacgatcgctttatggcgtttcataatgaagcg
aagattgctccgggagaaacggtgccaaaacctgactatcgcagttctagaaaatggcca
acgaatgagtacgatacttggggaatctacgcgcaaaatatgatgacgattaacgattac
tggcaggtgcttgcgggtgttcgttatgatgaaaaacgcagtgatgaactaacagagagt
caaatttctccgaagtttggtgtgactttccacccaacaccgaatggctcgatttatgtt
caatactctgagagctttatgcctcaagggcaggtaaacggtgacgattatactaacgat
ggtgaagagttagacgcggaacgcggcgtttcttacgaagttggtactaagtgggagctg
tttgatcaacgcctttatctaacaggtgctctatttgatatcaccttagagaacgtaaaa
ctaacggttgatgcgccaaacaacccgggtaaagaggcggtgacgcaagatggtgagcaa
gttcaccgtggtgcagaaatcttagcgcagggctttgtgacggataagttgtcgctaacg
gcttctgcaatgtatttagatgcagagattacacaaagtaaaaactataaaggtaaccgt
ccggcagatgtgccagagttttcggcgagtgtttggtctagctacaaagtgcaaggcaac
actaatctaaacctaggtttgatttatgaaggtgatcgctacggagatgcagcgaatact
ttcgaaaaagatgggtatgcacgcatagatatgggtgtgtcatacaagcataagtacgat
gaaaacttggatattattgctcgattcaatgtagaaaacctatttgatactgaatactta
gcgggtggtggtagtaccgaccctctagagtatgaaggagcgagcggtgtagtggttggt
gaaggccgaaactacatggcgacaatccagtttaagtactga
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