Vibrio sp. STUT-A11: VspSTUT11_36920
Help
Entry
VspSTUT11_36920 CDS
T10419
Name
(GenBank) LuxR family transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vib Vibrio sp. STUT-A11
Pathway
vib05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VspSTUT11_36920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vib03000
]
VspSTUT11_36920
Transcription factors [BR:
vib03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VspSTUT11_36920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
HTH_23
HTH_30
HTH_40
Sigma70_r4
HTH_10
HTH_11
HTH_24
HTH_38
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BDR15716
LinkDB
All DBs
Position
2:814385..815053
Genome browser
AA seq
222 aa
AA seq
DB search
MEYHTTGNIILVTEGSLQSSLLKDVLETKLGISVILLTPENLTSRSLQDQPISAIILDFS
ILTDETLLLYRNFKESEFAGIREILINCDRAISTEELFLWNTLVGIFYTSDDVQMLQTGI
DKILQGDMWFSRKFSQQYITHLRQNSKPVYKQAPSILTKRELQIITFLAMGASNQQIAKQ
LFVSENTVKTHLHNIFKKIEVKNRVQALIWAKENISEYSIPI
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggagtatcacacgacagggaatatcattttagttactgagggaagtttacaatcatct
ttattgaaggatgttttggaaaccaaactcggcataagcgttattttgctaacgcccgaa
aaccttactagccgatcgcttcaagatcagcccatttcagccattatcttagacttcagt
attctgaccgatgaaacgcttttgctataccggaactttaaagagtcagagtttgcgggt
attcgagaaattctgattaactgcgatagggcgatctctacggaagagctttttctttgg
aacacgctagtgggcattttttatacttctgatgatgttcaaatgctacaaacgggtatt
gataagatcttacagggtgacatgtggttcagccgtaaattttctcagcaatacattact
catcttcgtcagaacagcaagccagtatacaaacaagccccaagtatattaactaaaaga
gaactgcaaataatcacttttcttgccatgggagcgtcgaatcaacaaatcgctaaacag
ttgtttgttagtgaaaataccgtgaagactcacttgcacaacatctttaaaaaaatagaa
gtaaagaatagagttcaggcactcatttgggcaaaggaaaatatttctgagtattctata
cctatttaa
DBGET
integrated database retrieval system
