Vibrio sp. STUT-A11: VspSTUT11_38570
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Entry
VspSTUT11_38570 CDS
T10419
Symbol
catR
Name
(GenBank) transcriptional regulator CatR
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vib03000
]
VspSTUT11_38570 (catR)
Transcription factors [BR:
vib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VspSTUT11_38570 (catR)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BDR15881
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Position
2:complement(1004608..1005510)
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AA seq
300 aa
AA seq
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MELRHLRYFVAVAEEGNLTRAAEKLCIAQPPLTRQIKQLEEIVGVPLFIRKPRGLELTDG
GAYFLVHAKQILDKVMVTIEGTQQITKKRKTLFSIGFVPSVFYGQLPLMVRRLRKNKNLE
IVLHELTTRDQIEALKTGKIDIGFGRVHIDDPEIEQELLFEEPLIAAIPSGHELGKSNPS
LQELAEIPMITFPTGPGAQFAHFTQGLFYNRGLRSNVSQQVNDLQTALSLVASEMGFTLV
PEQVRKLNREGIEYVRLQDTSIKTQVIASRRRGENINAVMRLVNTILEELVENRRTGRYS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagttaagacacctgcgatactttgtcgctgtcgctgaggaaggaaatctcaccaga
gccgcagaaaagctatgtattgcccagccgccgctaactaggcagataaagcaacttgag
gaaatagttggcgttccgctgtttattcgtaagccccggggactagagttgacggatggc
ggcgcgtactttttagttcatgcgaaacaaattctcgacaaagtgatggtgacgattgaa
ggaacgcagcagataacgaaaaaacgcaaaacattattttctatcggctttgttccttcg
gtgttttacggccagctaccactgatggtaagacggctaaggaaaaacaaaaatttagaa
atcgtgttacatgaattaacaactcgtgaccaaattgaagcgttgaaaacaggaaaaatt
gatatcggcttcggccgagtccatatcgatgaccctgaaatcgaacaggaactgctgttt
gaggaaccgttaatagctgcaattccgagtggtcatgagttagggaaaagtaacccttcc
ttacaagaattggccgaaattccaatgatcacgtttcccactggtcccggcgcacaattt
gctcattttactcagggactattttataaccgtggtttaagaagcaatgtcagccaacaa
gtcaatgacttacaaaccgcactttccttggttgcttcagagatgggatttacattggtt
ccggaacaggtacgtaaactaaaccgagaaggtattgagtacgtccggctccaagatacc
agtatcaaaacacaagtcatcgcctctcgccgacgaggagaaaacatcaacgcggtaatg
cgactagtgaacacaatcttggaagagctagttgaaaaccgcagaacgggccgatactcc
taa
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