Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) nuclease SbcCD subunit D
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
vib Vibrio sp. STUT-A11
|
Brite |
KEGG Orthology (KO) [BR:vib00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:vib03400]
VspSTUT11_41910 (sbcD)
DNA repair and recombination proteins [BR:vib03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VspSTUT11_41910 (sbcD)
Archaeal homologous recombinant proteins
VspSTUT11_41910 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:1372110..1373243
|
AA seq |
377 aa
MKFIHTSDWHLGRQFHNVSLLDDQQAVLDQLIKYIEDNPVDAVVVAGDVYDRSVPPTVAI
ELLNRVVKRICTELKTPMILISGNHDGAERLGFGSEQMKNSGLHIISNFEDMLSPVVITT
KSAGEVALYGMPYNDPEQVRFAYKEAVSTHDEAHKLLVEKITEQFQPQQKKVLISHCFVD
GAIESDSERPLSIGGSDRVSHEHFLSFDYVALGHLHQPQKKGEEYIRYSGSLMKYSFGEQ
NQKKGFTLVEINESGFASAEHIELIAPHEMRIIEGDLEQVIEKGKTDPKNEDYLLVRLMD
KHAILNPMEKLRAVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFRDFFTEAQDSQLS
QEQEQAVNDIIKQLSQQ |
NT seq |
1134 nt +upstreamnt +downstreamnt
atgaagtttatccatacctcagattggcacctaggccgacagttccacaacgtttcatta
ctcgatgatcaacaagcggttctcgatcaattgattaaatacattgaagacaaccccgtc
gatgctgtcgtggtggctggggatgtgtatgatcgctctgtaccgcctacggtcgccatc
gaattattaaaccgagtggtaaagcgaatttgtaccgagcttaaaacaccgatgattttg
atttccggaaatcacgatggtgccgagcgcctgggcttcggttctgaacagatgaaaaac
tcgggtttgcatatcatcagtaactttgaagatatgctttcacctgtggtgattacgacc
aagtcagcaggtgaggtcgcgctctatggtatgccatacaacgatcctgaacaggtcaga
tttgcttataaagaagccgtttctacccatgatgaagcgcataaactcttggtagaaaaa
atcactgagcaatttcagccacaacaaaaaaaggtgcttatcagccactgtttcgttgat
ggtgctattgagtcggattcggagcgaccgctttctatcggtgggtctgatcgcgtaagt
cacgaacactttctgagcttcgactatgttgctcttggccatttgcatcaaccgcagaag
aagggtgaagagtacattcgttactctggctctttgatgaaatacagtttcggtgagcag
aaccaaaagaaaggtttcacgctggtggaaatcaacgagagtggttttgcgtctgctgag
catattgagcttatcgccccgcatgagatgcgaattattgaaggtgatttagagcaggtc
attgagaaagggaaaacggatccgaagaatgaagactacttacttgtacgtctgatggat
aagcacgccattttgaacccaatggaaaaactgcgtgcggtctacccaaatgttttacac
ctagagaaaccgggcatgttgattggcgttgaacaggaaatggcgcaagccaaacttgct
cgcagtgaaattgatatgttccgtgatttcttcactgaagcgcaggacagtcagttatcg
caagaacaagaacaagccgtcaacgatattatcaagcaattatcacagcagtaa |