Vibrio sp. STUT-A11: VspSTUT11_41910
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Entry
VspSTUT11_41910 CDS
T10419
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vib Vibrio sp. STUT-A11
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vib03400
]
VspSTUT11_41910 (sbcD)
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VspSTUT11_41910 (sbcD)
Archaeal homologous recombinant proteins
VspSTUT11_41910 (sbcD)
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Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
B12-binding
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
BDR16215
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All DBs
Position
2:1372110..1373243
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AA seq
377 aa
AA seq
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MKFIHTSDWHLGRQFHNVSLLDDQQAVLDQLIKYIEDNPVDAVVVAGDVYDRSVPPTVAI
ELLNRVVKRICTELKTPMILISGNHDGAERLGFGSEQMKNSGLHIISNFEDMLSPVVITT
KSAGEVALYGMPYNDPEQVRFAYKEAVSTHDEAHKLLVEKITEQFQPQQKKVLISHCFVD
GAIESDSERPLSIGGSDRVSHEHFLSFDYVALGHLHQPQKKGEEYIRYSGSLMKYSFGEQ
NQKKGFTLVEINESGFASAEHIELIAPHEMRIIEGDLEQVIEKGKTDPKNEDYLLVRLMD
KHAILNPMEKLRAVYPNVLHLEKPGMLIGVEQEMAQAKLARSEIDMFRDFFTEAQDSQLS
QEQEQAVNDIIKQLSQQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatccatacctcagattggcacctaggccgacagttccacaacgtttcatta
ctcgatgatcaacaagcggttctcgatcaattgattaaatacattgaagacaaccccgtc
gatgctgtcgtggtggctggggatgtgtatgatcgctctgtaccgcctacggtcgccatc
gaattattaaaccgagtggtaaagcgaatttgtaccgagcttaaaacaccgatgattttg
atttccggaaatcacgatggtgccgagcgcctgggcttcggttctgaacagatgaaaaac
tcgggtttgcatatcatcagtaactttgaagatatgctttcacctgtggtgattacgacc
aagtcagcaggtgaggtcgcgctctatggtatgccatacaacgatcctgaacaggtcaga
tttgcttataaagaagccgtttctacccatgatgaagcgcataaactcttggtagaaaaa
atcactgagcaatttcagccacaacaaaaaaaggtgcttatcagccactgtttcgttgat
ggtgctattgagtcggattcggagcgaccgctttctatcggtgggtctgatcgcgtaagt
cacgaacactttctgagcttcgactatgttgctcttggccatttgcatcaaccgcagaag
aagggtgaagagtacattcgttactctggctctttgatgaaatacagtttcggtgagcag
aaccaaaagaaaggtttcacgctggtggaaatcaacgagagtggttttgcgtctgctgag
catattgagcttatcgccccgcatgagatgcgaattattgaaggtgatttagagcaggtc
attgagaaagggaaaacggatccgaagaatgaagactacttacttgtacgtctgatggat
aagcacgccattttgaacccaatggaaaaactgcgtgcggtctacccaaatgttttacac
ctagagaaaccgggcatgttgattggcgttgaacaggaaatggcgcaagccaaacttgct
cgcagtgaaattgatatgttccgtgatttcttcactgaagcgcaggacagtcagttatcg
caagaacaagaacaagccgtcaacgatattatcaagcaattatcacagcagtaa
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