Vibrio sp. STUT-A11: VspSTUT11_41920
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Entry
VspSTUT11_41920 CDS
T10419
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vib Vibrio sp. STUT-A11
Brite
DNA repair and recombination proteins [BR:
vib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VspSTUT11_41920 (sbcC)
Archaeal homologous recombinant proteins
VspSTUT11_41920 (sbcC)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDR16216
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Position
2:1373253..1376309
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AA seq
1018 aa
AA seq
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MKPIKLTMQAFGPFAKTETIDFEKLGSNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RLGIQMRCDLAAVDLPTEVTLEFSLHNKVYRVVRSPEQEAPKARGDGMTVRKHMASLYEL
GDSEKLITSKTTQVKTEITNIIGLTETQFRQVMVLPQGKFRELLLASSKEREEIFGQLFQ
TDIYKKIEYALKDKASAISKAKNEFDNQIRGALQVAGVSSEEELGVQRETISTQLEEEKK
SEQASLEVLNSIKSELQKAQALAGEFTRREQAEVALKTHLENTEEIAVRQDQLDTAKSAS
KIELQYVALQNAKAQSQQLSEKISALSQNLNEATNVVTVKEAELKTAKQNVEQVPQLTQL
QFNLEVMKEKLIEKSDWEAKIANGLQQKQQFETKLQQYVSLKDKLTLDAQQGQKNLDQAR
VDVALVGSIEAEIKQKQRLLQDVQKLVSLKQEYAKHDTLTADKQQKVELANQTYLKAQQL
ADRIELKWHNAQAAVLARRLQTGEACPVCGSCEHPHPAQFSEEEVTKEQVQTARAQEREA
QASYNQLSNQLEQHHVVARQYQKQVDELSQELGEHAKTEVITIQAELQLANEKLQKLTAI
DIAELEKNVEQLNQRCVVGETKINELQNQMAANESTIKANQGQLNKLLENLDPKYRSVEV
IEHEITQTKEQVKRLNESLESAQKQLQQAMLAKSNIESQLTTNKQWLAESELKLDEAKSN
WQKALGESRFEDEENYLQSKATEQELQSWLQEIDEFKQVQIKLEQTLYDLNQVLKDQEKP
NLEEINAKLNAQQQHYVESRNKLDSVRSTFERIEKVSDDIVALHDKNSKLEAEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQSSQRLSLMSKGRYILARKTEGFKGAAGRGLD
LVVEDGYTGKMRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMAQRIDVEPSRIGSTVSVKSQMALAD
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctattaaactcaccatgcaagcttttggtccctttgcaaaaacggaaaccatc
gatttcgaaaagcttggtagtaatcctttatttttgattaatggcccaaccggttcgggc
aaaacctctatcctcgacgcgatttgttttgcgctttatggcgaaacgacaggtaacgaa
cgtctgggtattcagatgcgatgtgatctagcagctgttgatttacctaccgaagttacg
ttggaattttcacttcacaataaagtataccgcgttgtccgttcaccagagcaagaagcg
ccgaaggctcgtggcgatggcatgacggtacgaaagcacatggcatcactttatgaatta
ggtgatagcgagaagctgattaccagtaaaaccactcaggttaaaaccgaaatcactaac
atcattggcttaacagaaacgcagtttcgccaagtgatggtgctccctcagggaaaattt
cgcgagttgttgctggcgagctcgaaagaacgtgaggagatcttcggtcagttatttcag
accgatatctacaagaaaattgagtacgccctgaaagataaagcaagcgcgatcagtaaa
gcgaagaacgagtttgataaccagattcgcggtgcattgcaagtggcgggagtaagttca
gaagaagaactgggtgtgcaacgagagactatttcaacgcaacttgaagaagagaaaaag
agcgaacaagcctctctagaagttcttaacagcattaagtctgagctacagaaggcacaa
gcacttgctggagagtttactcgtcgtgagcaagccgaggtagcgctaaagacacactta
gagaacaccgaggagatagcggttcgccaggatcaattagacacagcaaagagtgccagt
aaaattgagctgcagtatgtcgctttacaaaacgccaaggcgcaatcacaacagctatct
gagaagatttccgcactcagccaaaacttaaacgaagccacgaacgtggtgacggtaaaa
gaagcagagctgaaaacagcaaaacagaatgtagagcaagttccccagctgacgcagttg
cagtttaatctcgaagtaatgaaagagaaactgatcgaaaagtcagattgggaagcgaaa
atcgccaacgggttacaacagaaacagcaattcgaaaccaaactgcagcaatacgtcagt
ttaaaagacaagctgaccctagatgcgcagcaagggcagaagaacctggatcaggcccgt
gttgatgttgctttagttggtagcattgaggccgaaatcaagcaaaagcaacgccttttg
caggatgtccaaaagctggttagtttaaaacaagagtacgcgaaacatgatacgttaacc
gctgacaagcaacagaaggttgaactagcaaatcaaacgtatcttaaagctcagcagtta
gcggatcgcatagagctaaaatggcacaacgcacaagcggcggttttagcccgaaggcta
caaacaggggaggcgtgtccggtttgtggcagttgcgaacatcctcatcctgcacagttt
agcgaagaagaggtaaccaaagagcaagttcaaacggctcgagctcaggagcgagaggca
caagcttcatataaccagcttagcaaccaactggaacagcaccatgttgtcgctcgacag
taccaaaaacaagtggatgagctttcacaagaacttggtgagcatgctaaaaccgaagta
atcacgattcaggctgagcttcagttagcaaatgaaaaattgcaaaaactgacggctatt
gatatcgcagagttagagaaaaacgttgaacagcttaaccagcgctgtgttgttggcgaa
acaaagatcaacgagctgcaaaatcaaatggcggccaacgaatcaacaattaaggcaaat
cagggtcagctgaataaattgttggaaaaccttgatccgaaataccgttcggtggaagtg
attgagcacgaaataacgcaaacgaaagagcaggttaaacgtcttaacgaaagtctggaa
agtgctcagaaacaacttcaacaagcgatgttagctaagtcgaatattgaaagtcagcta
accaccaacaagcagtggttagcggagtcggagctaaaactcgatgaggcaaaatcgaac
tggcaaaaagcactgggcgaaagccgttttgaggatgaagaaaattatcttcaaagcaaa
gcgacagaacaagagctgcaatcctggctgcaagaaatagacgagtttaagcaggttcaa
atcaagctagaacaaaccttgtatgaccttaatcaagtgttaaaagatcaagaaaaaccg
aaccttgaagaaattaacgccaagttaaacgctcagcaacaacactacgtcgagtctcgc
aacaagctagattctgtacgttctacttttgagcgtattgaaaaggttagcgacgatatt
gtcgctttacatgacaagaacagcaagctcgaagcagagtataaagtctttggtacgctt
tatgacgtggcgagtggtaaaaccggtagccgtatcagtttgcatcgttttgtactcggc
gttcttttagatgatgtattgattcagtcttcgcagcgattaagtttgatgagtaaaggc
cgttacattcttgcacgcaagacggaagggtttaaaggagctgcaggccgtgggcttgat
ctcgtggttgaagatggttacaccggtaaaatgcgtgatgttgcaacgctttctggtggt
gagtctttcatggctgcactggctttagcgcttggtctttctgatgtcgtacaatcctac
agcggggggattcgcttggatacactgttcattgatgaaggctttggtagcctggaccct
gaatctttggatcttgcgattcaaaccttagtcgatctgcagcaaacaggccgaatgatc
ggtgtgatttctcacgtatcggagcttaaagaacagatggcacaacgcattgatgtagag
ccttctcgtattgggtcaaccgtttcggttaagtctcaaatggcgctagctgattaa
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