Vibrio sp. STUT-A11: VspSTUT11_43790
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Entry
VspSTUT11_43790 CDS
T10419
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00260
Glycine, serine and threonine metabolism
vib00630
Glyoxylate and dicarboxylate metabolism
vib00670
One carbon pool by folate
vib00785
Lipoic acid metabolism
vib01100
Metabolic pathways
vib01110
Biosynthesis of secondary metabolites
vib01200
Carbon metabolism
Module
vib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VspSTUT11_43790 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VspSTUT11_43790 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VspSTUT11_43790 (gcvP)
00670 One carbon pool by folate
VspSTUT11_43790 (gcvP)
Enzymes [BR:
vib01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
VspSTUT11_43790 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF7572
DUF6227
Motif
Other DBs
NCBI-ProteinID:
BDR16403
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All DBs
Position
2:1582800..1585679
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AA seq
959 aa
AA seq
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MTELLQSLSTQNEFVARHNGPNKSDQQKMLDAINVANLDALIEETVPAQIRLEKPLALAE
AKSEADMLVAMRKFADQNQIKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTLEVVKTRAKYIGFEVLVDSLESLPEQDVFGALVQYPGTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDVNGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVFHGAEGLRTIAR
RTHHMTAILAAGLTKSGYELAHNSFFDTITLNTDGKTEELYAKAQAADINLRLLQGEGQG
GKLGISLDETTTTDDINALFEVFGVQQDVNALSSEISGNEFAAIPEALRRTSKFLTHPVF
NTHHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPL
EQAAGYSALAKDLKEKLCEITGYDDFSLQPNSGASGEYAGLIAIQRYHDSRGEGHRNVCL
IPSSAHGTNPATASMVSMKVVVVKCDEDGNIDMTDLAAKIEKHKDNLSSIMITYPSTHGV
YEEHVKEVCEMVHSAGGQVYLDGANMNAQVALTSPGFIGSDVSHLNLHKTFCIPHGGGGP
GMGPIGVKSHLATFLPGHIENGVEGKELAVSAADMGSASILPISWAYIAMMGEAGLQEAT
KVAILNANYVMERLRPHYPILYRGKNGRVAHECIVDIRPLKEETGISEEDIAKRLMDYGF
HAPTMSFPVAGTLMVEPTESEDLEELDRFCEAMIAIREEMTKVKNGEWPLENNPLVNAPH
TQVDLAAAEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaatgagttcgttgctcgccacaacggc
ccaaacaaatccgaccaacaaaaaatgttggatgcgatcaatgttgctaaccttgacgca
cttatcgaagaaacggttccagcacaaattcgcctagaaaagccactagcactagcagag
gcgaaaagcgaagcagacatgctggttgcgatgcgcaaattcgctgatcaaaaccaaatt
aaacgtacgttcatcggccaaggttactacaacaccttcacgccaaatgtcattctacgt
aacgtactagaaaacccaggctggtacacagcttacactccttaccaaccagagatatct
caaggtcgtctggaagcacttctgaactaccaacaaatggtcatggatctaactggtatg
gaaatcgcgaacgcttctcttcttgatgaagcaacggcagcagctgaagcgatgacgcta
tgtaagcgtgcgggtaagagcaaaagtaacgtattcttcgtggctgacgatgttcaccca
caaactctagaagttgtaaaaactcgtgcgaaatatattggctttgaagtactcgttgat
tcacttgaatcactaccagaacaagacgtatttggcgcacttgttcaatacccaggcaca
acgggtgaagtacgtgatctaaccgacatcatcgcgaaagcacaagctaacaaaacgttg
gtaacggttgctactgacctacttgcttctactctgctgaaaccagcaggcgaaatgggg
gcagacgtggttatcggttctgctcagcgtttcggtgtaccaatgggttacggcggtcca
cacgcagcattcatggcaactcgtgacaagcataagcgtacaatgccaggtcgtgtaatc
ggtgtttctatcgatgtaaacggcaaccaggcactgcgcatggcaatgcagacacgtgaa
cagcacatccgccgtgaaaaagcgacatcaaacatctgtactgcgcaagcactactggcg
aacatggcatctttctacgcggtattccacggcgcagaaggtctacgcacgatcgctcgt
cgcactcaccacatgactgcgattctggctgctggtctgactaagtctggctacgagctt
gctcacaatagcttcttcgataccatcacactcaatactgatggcaaaactgaagagctt
tacgcgaaagcacaagcggcagacatcaacctacgcctccttcaaggtgaaggtcaaggc
ggcaaactaggtatcagcttagacgaaacaacaaccactgacgacatcaacgctctattt
gaggtgtttggtgtacaacaagatgttaacgctctgtcttctgaaatctctggcaacgag
tttgctgctattcctgaagcgctacgccgcacgtctaagttcctgactcacccagtattc
aacacgcaccacagcgaaacgcaaatgatgcgttacctgaaacagctagagaacaaagac
ttctctctgactcacggtatgatcccactgggcagctgtacaatgaaactgaacgcagca
gcagagatgatccctgttacttggcctgagtttggttctatccacccattcgctcctcta
gagcaagcggcaggttactctgcgctagcgaaagatctgaaagagaagctatgcgaaatc
actggttacgatgatttctctctacagccaaactctggtgcgtctggtgaatacgcaggc
cttatcgcgattcaacgctaccacgacagccgtggcgaaggtcaccgtaacgtatgtttg
atcccaagctctgcgcacggcactaacccagcgacagcgtcaatggtatcaatgaaagtg
gttgtggttaaatgtgatgaagatggcaacatcgacatgacagacctagcagcgaaaatc
gagaaacacaaagacaacctatcaagcatcatgatcacttacccttctacgcacggcgta
tacgaagagcacgtgaaagaagtatgtgaaatggttcattcagcaggtggtcaggtttac
ctggacggcgcaaacatgaacgcgcaggttgctctaacgtctccaggtttcatcggctct
gacgtttctcacctgaacctacataaaaccttctgtatcccacatggtggtggcggtcca
ggtatgggtcctatcggtgttaaatctcacctggcgactttcctaccaggtcacatcgaa
aatggtgtagaaggtaaagagttagcggtttctgcagcagatatgggtagcgcatctatt
ctacctatttcttgggcttacatcgcaatgatgggtgaagctggcctacaagaagcgact
aaagttgcgattctgaacgccaactacgtgatggagcgtctgcgtccacactacccaatt
ctttaccgtggtaaaaatggccgtgtggcgcacgaatgtatcgttgatattcgtccgctt
aaagaagaaacaggcatcagcgaagaagacatcgcgaagcgtctaatggactacggtttc
cacgcgccaacaatgtcattcccagttgctggtacactgatggttgaaccaactgaatca
gaagatttggaagagctagaccgcttctgtgaggcaatgatcgcaatccgtgaagagatg
acaaaagtgaaaaacggtgaatggccactagagaacaatcctctggttaacgcaccgcat
actcaagtggatcttgcagcggcagaatgggatcgcccttactctcgtgagctaggctgc
ttcccatcgaaagcgactaagtcttggaaatactggccaactgtgaaccgtgtagataac
gtttacggcgaccgtaacctaatctgctcgtgcccaagcattgataactacgaagactaa
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