Vibrio sp. STUT-A11: VspSTUT11_44970
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Entry
VspSTUT11_44970 CDS
T10419
Symbol
rnb
Name
(GenBank) exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vib Vibrio sp. STUT-A11
Brite
Enzymes [BR:
vib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VspSTUT11_44970 (rnb)
Transfer RNA biogenesis [BR:
vib03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VspSTUT11_44970 (rnb)
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NCBI-ProteinID:
BDR16521
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Position
2:1718208..1720211
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AA seq
667 aa
AA seq
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MFQDNPLLAQLKQQMQENLPKKEGSIKATDKGFGFLEVDSKTSFFIPPAYMKKCIHGDKV
VAIIRTENEREVAEPQELLEQSLTRFIGRVKMFKGKLNVVPDHPQLKKLSLKAKLKKGLK
PDSFNEGDWVVAHLIRHPLKGDNTFFVEISEKITDADDKIAPWWVTLAQNDLPNSEPAGI
ENWALKDDADLERVDLTHIPFVTIDGESTKDMDDALHAKKTASGDFELTIAIADPTAYIT
PEDEMDKVARERGYTIYLPGRNIPMLPRDLADDLCSLIEGETRPALCCTVTVSQEGVVGE
DINFFAANIKSHARLAYDHVSDWLENGISDKWQPSEDIATIVRDLYEFSLARADWREKNA
VVFPDRPDYRFELSEDNDVIAIHADMRRSANRLVEESMITANICAGRTLREKFEMGVFNT
HSGLKAEKVEEVVQLVDPEGTHGFTADSISTLEGFAALRRWLSVQETSYLDNRIRKFQAY
SEVGNEPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILNKEPVQKPDDQVGEELAL
HRKHHKIAERNVSDWLYARTLAEEPSKQTRYTGEIFDINRAGARVRLLENGAAAFIPGSL
IVDNKERIECNADNGTISIDKEAVYKLGDTLEVVLADVNQENRSLVAKPTQVFAEPPKAQ
TEQTVSE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctattagcccaacttaagcagcaaatgcaagaaaaccttcct
aaaaaagaaggttcaatcaaagcaacagataaaggctttggtttccttgaagtggatagc
aaaaccagcttcttcattccaccagcgtacatgaaaaagtgcattcacggcgacaaagtt
gtcgctattattcgcacagagaatgaacgcgaagtcgcagaaccacaagagctgctagaa
cagtcacttactcgctttattggccgtgtgaaaatgttcaaaggtaagctgaatgttgtc
cctgaccaccctcaactgaaaaagctttctctgaaagcaaaactgaagaaaggtctgaaa
ccagatagcttcaatgaaggtgattgggttgtcgcccatcttattcgccaccctctaaaa
ggggacaatactttctttgtagaaatctccgagaaaatcacggatgccgacgacaaaatc
gcaccatggtgggtcaccttggcacaaaacgatcttccaaactctgaacctgctggtatt
gagaactgggcattaaaagacgacgccgacttagagcgcgtcgatttaacgcacatacca
ttcgtaactatcgatggtgaatccaccaaagatatggacgatgcgctccacgcgaagaaa
acagcgtctggtgattttgaactgaccatcgcgattgccgatcctaccgcgtacattacg
ccagaagatgaaatggacaaagtggctcgcgaacgcggttacaccatctacttgcctggt
cgcaatatcccaatgctaccgcgcgatcttgccgatgatttatgctctctgattgaaggt
gaaacacgccctgcactttgctgtaccgtaaccgtaagccaagaaggagtggttggtgaa
gacatcaacttctttgccgctaacattaaatctcacgctcgtcttgcttatgaccacgtg
tctgactggctggaaaatggtatctcagataaatggcaaccatcagaagatatcgccaca
atcgtacgcgatctttacgaattttctcttgctcgtgcggactggcgtgaaaagaatgct
gtcgtattcccagatcgtccagattaccgttttgaactaagcgaagacaatgacgttatc
gctattcatgcagacatgcgtcgtagcgcgaaccgccttgtagaagagtcgatgatcacg
gcgaatatctgtgctggccgtactctacgcgaaaagtttgaaatgggtgtatttaatact
cactcaggccttaaagcagaaaaagttgaagaagtggttcagttggttgaccctgaaggc
acacatggcttcacggctgactcaatttcaacgctggaaggctttgcagcattgcgccgc
tggttgtctgttcaagagacttcttacctggataaccgcattcgcaaattccaggcgtac
agtgaagtcggtaatgaaccgcttcctcactacgcaatgggcttagacatttacgcgact
tggacatcaccaattcgtaaatacggcgatatgatcaaccaccgtatgctaaaagcggtt
attctgaacaaagagccagttcaaaaacctgatgatcaggttggtgaagaactggcacta
caccgtaagcaccacaaaatcgctgagcgcaatgtgtctgattggttatatgctcgtact
cttgcagaagagccaagcaaacaaactcgttacacaggcgagattttcgatatcaatcgt
gctggtgcacgtgttcgcctgcttgaaaatggcgcagcagcctttattcctggctcactg
attgttgataataaagagcgcattgagtgtaacgctgacaacggcacaatctctatcgat
aaagaagccgtatacaaactgggggatactttggaagtcgtcttagcggatgtaaaccaa
gaaaaccgtagtttagtcgctaagccaacccaggtgtttgctgagccgccaaaagcacaa
acagaacagactgttagtgaataa
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