Vibrio sp. STUT-A11: VspSTUT11_45430
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Entry
VspSTUT11_45430 CDS
T10419
Symbol
glyA2_2
Name
(GenBank) serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00260
Glycine, serine and threonine metabolism
vib00460
Cyanoamino acid metabolism
vib00630
Glyoxylate and dicarboxylate metabolism
vib00670
One carbon pool by folate
vib00680
Methane metabolism
vib01100
Metabolic pathways
vib01110
Biosynthesis of secondary metabolites
vib01120
Microbial metabolism in diverse environments
vib01200
Carbon metabolism
vib01230
Biosynthesis of amino acids
vib01240
Biosynthesis of cofactors
vib04981
Folate transport and metabolism
Module
vib_M00140
C1-unit interconversion, prokaryotes
vib_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VspSTUT11_45430 (glyA2_2)
09102 Energy metabolism
00680 Methane metabolism
VspSTUT11_45430 (glyA2_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VspSTUT11_45430 (glyA2_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VspSTUT11_45430 (glyA2_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VspSTUT11_45430 (glyA2_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VspSTUT11_45430 (glyA2_2)
Enzymes [BR:
vib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VspSTUT11_45430 (glyA2_2)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BDR16567
LinkDB
All DBs
Position
2:complement(1779484..1780746)
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AA seq
420 aa
AA seq
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MFNTTQNIEAYDSELWSAIVKEEQRQEDHIELIASENYTSPRVMQAQGSKLTNKYAEGYP
AKRYYGGCKFVDEVEVLAIERAKQLFGAEYANVQPHSGSQANAAVYMALCEPGDTVLGMS
LAHGGHLTHGSHVNFSGKIYNAVQYGLNAETGEIDYEQVEQLALEHKPKMIVAGFSAYSR
VVDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVATTTHKTLRGPRGGLI
VSRDAELEKKINSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFAEYQKQVVANAQVMAKV
FIERGFDVVSGGTDNHLFLLSLIRQKLTGKAADAALGMAGITVNKNAVPDDPQSPFVTSG
LRIGTPVITTRGFGEAECEMLAGWISDILDVLDDPQALASTIEVVGSKVQSLCRDFPAYQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacactactcaaaacatcgaagcgtacgacagtgaactatggtcggcgattgta
aaagaagaacagagacaagaagaccacattgagctgattgcttctgaaaactacaccagt
ccacgagtgatgcaagctcaaggtagtaaactaaccaataaatacgctgagggttacccg
gcaaaaagatactacggtggctgtaaattcgttgatgaagtagaagtattggcgattgaa
cgtgcaaaacaactgttcggtgcggaatacgcgaacgtacaaccacactcagggtcacaa
gcaaacgctgccgtgtacatggctctttgtgaaccaggtgacacagtactaggcatgagc
cttgctcacggtggtcacttgactcacggttcgcacgttaacttttcaggcaaaatttac
aacgctgttcaatacggtctaaacgctgaaacgggcgaaatcgactacgaacaagttgaa
caacttgctcttgagcacaagcctaaaatgatcgttgctggtttctcagcatactcacgt
gtcgttgactggcaacgtttccgcgatatcgcggacaaagttggcgcttacctattcgtt
gatatggcgcacgtggcgggtctggttgcagctggtgtttatccaaacccagtacctttc
gcggatgttgtagcgacgacaacacacaaaacgctacgcggtccacgcggtggtttgatt
gtttctcgcgacgctgaactagagaaaaagatcaactctgctgttttccctggtggtcag
ggtggccctctaatgcacgtgattgcggcaaaagcagtagcgtttaaagaggcgttagag
ccagaattcgctgaataccagaaacaagttgtggctaatgctcaggtaatggcgaaagta
tttatcgagcgcggtttcgacgttgtatcaggtggtacagacaaccacttattcctattg
agcttaatccgtcaaaaactgacaggtaaagcggcagacgcagcacttggcatggcgggt
atcaccgtaaacaaaaatgctgtaccggacgatccacaatctccattcgttacttcaggc
ctgcgtattggtacaccagtgatcacaacacgtggtttcggtgaagcagaatgtgaaatg
ttggcaggttggatctcagacattcttgatgtccttgatgacccgcaagcgctggcaagc
acgattgaagtcgtaggaagcaaagtgcagtcactatgccgtgatttccctgcataccaa
tag
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