Vibrio sp. BS-M-Sm-2: ACJ3Y0_04305
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Entry
ACJ3Y0_04305 CDS
T11939
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vibr Vibrio sp. BS-M-Sm-2
Pathway
vibr02020
Two-component system
vibr02040
Flagellar assembly
vibr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vibr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACJ3Y0_04305
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ACJ3Y0_04305
09142 Cell motility
02040 Flagellar assembly
ACJ3Y0_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vibr03000
]
ACJ3Y0_04305
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vibr02035
]
ACJ3Y0_04305
Transcription factors [BR:
vibr03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACJ3Y0_04305
Bacterial motility proteins [BR:
vibr02035
]
Flagellar system
Flagellar assembly proteins
Others
ACJ3Y0_04305
SSDB
Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
XLW36856
LinkDB
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Position
1:complement(976709..978175)
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AA seq
488 aa
AA seq
DB search
MQGLAKLLVVDDNAQDRHNLSTILEFVGESCEVISSEQARKVDWSLQWAGCIIGTIKGKG
FNALLSEKLVHANHIPLLVIGKNNHPVDELTNYVGELELPLNYPQLSDALRHCKDFLGRK
GVQVVSSARKNTLFRSLVGQSAGIQEVRHLIEQVSSTEANVLILGESGTGKEVVARNIHY
HSKRRSGPFVPVNCGAIPPDLLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGD
MPMAMQVKLLRVLQERCFERVGGNSTIQADVRVIAATHRNLEDMIDDDSFREDLYYRLNV
FPIEMPALQDRKEDIPLLLQELMTRMEAEGSMPICFTARAINSLMEHYWPGNVRELANLV
ERMVILYPNSLVDVNHLPTKYRYSDIPEFQPEFNSFVSEEEQERDALSDLFAEDFSFDQQ
DELADNANAPQELPPEGVNLKELLADMEVNMINQALEAQGGIVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaaactgcttgtcgtcgacgataacgctcaagatcgtcacaattta
agcacaatattagagtttgtaggagagagctgcgaagtaatcagctctgaacaagcacgt
aaagttgactggtcactacagtgggccggctgcattattggtaccattaaaggtaaaggc
ttcaacgcattactgagtgagaagcttgttcacgccaatcacatccctttactggtgatt
ggcaaaaacaatcacccggttgacgagttgactaactatgttggtgagcttgaacttcct
cttaactacccgcaattaagtgatgcattaagacactgtaaagacttcttaggccgtaaa
ggtgttcaagttgtgtcttctgcacgtaagaacacactgtttcgcagcctagtaggccaa
agtgctggcattcaagaagtacgtcatttaattgaacaagtctcttctacggaagcaaac
gtgctgattcttggtgagtcaggcacaggcaaagaagtcgtcgcgcgtaacattcattac
cactctaaacgtcgttcagggcctttcgtaccagtgaactgtggcgcgattccacctgat
ttgctcgaaagtgaattatttggtcatgagaagggcgcgtttactggtgcaattaccgct
cgtaaaggccgttttgaattggctgaaggtggcacactgtttctcgatgaaattggcgat
atgccaatggcgatgcaagttaagctgctacgagtgcttcaagagcgatgttttgagcgc
gtaggtggtaacagcaccatacaagctgatgttcgtgtgattgcggcaacccaccgtaac
cttgaagatatgatcgatgatgattcgttccgtgaagacctttattatcgcttgaatgta
ttcccgattgaaatgccggcgcttcaagatcgtaaagaagatattccactgttgcttcaa
gaactaatgactcgaatggaagcggaaggcagtatgcctatctgcttcacggctcgtgct
atcaattctttgatggagcactactggccaggtaacgttcgtgagctagcgaacctcgtt
gagcgaatggttatcctgtatccgaatagcttggttgatgtgaatcatctacccactaaa
tatcgatacagtgatattcctgaattccagcctgagtttaatagctttgtctctgaagaa
gagcaagagcgtgatgcactttccgacttgttcgcagaagattttagctttgatcagcaa
gatgaacttgccgacaacgctaatgcgcctcaagagttaccgccagaaggggttaacctg
aaagagctactcgcagatatggaagtgaatatgatcaatcaagccttggaagcacagggc
ggtattgttgctcgtgctgctgatatgcttggaatgcgcaggaccactctggttgaaaaa
atgcgtaaatataacttgcagcgatag
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