Vibrio iocasae: SNR28_01985
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Entry
SNR28_01985 CDS
T11169
Name
(GenBank) glycoside hydrolase family 13 protein
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
vic Vibrio iocasae
Pathway
vic00500
Starch and sucrose metabolism
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SNR28_01985
Enzymes [BR:
vic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
SNR28_01985
3.2.1.133 glucan 1,4-alpha-maltohydrolase
SNR28_01985
3.2.1.135 neopullulanase
SNR28_01985
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_N
GHL6
Glyco_hydro_66
DUF5696
DUF6022
Motif
Other DBs
NCBI-ProteinID:
XHF82791
LinkDB
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Position
1:436220..438004
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AA seq
594 aa
AA seq
DB search
MITISSLTHSAKSADSYAYDNTTLHIRFRSAKGEVDRVALWIGDPYHWAEGGLDGGNLGG
SDAHGWVGGNEVEMKLEGSTEHHDHWFAEFKPPKLRSRYGFILYGKEGEKLLFGEKRCVD
ISTDESAEIELSNLSNFYCFPYINPRDVLKTPKWVQETVWYQIFPERFFNGKPEISPQNV
QPWGTTPTETNFMGGDLWGVIEKLDYLQELGVNGLYFCPVFTANANHKYDTVDYFGVDPH
FGGNEAFKALVDEAHNRGMKVMLDAVFNHIGDQHPIWLDVVENGKESRFADWFWIKEFPV
YPDVPKEEIDLWNLNYETFGNVAEMPKLNTENEECRQYLLDVAEYWVKEFDIDGWRLDVA
NEVDQEFWRDFRRVVKGINPECYILGEIWHEGMPWLRGEQYDSLMNYPLTQAMTDYFALG
TYDKETFMNAVTSSYLSYPKNVNEAMFNLLESHDTTRLISLCNGDKRKAKLAYLFMFTQV
GAPCIYYGGEVGMHGRRGWGKEDNRKCMIWDESEQDLDFKSFIQSLIQLRHEHPEFNLPE
MAWLEIQHESVVAYRKGSIIFVLNNSESLVEMEYEGEKLTLSPYGFSVIGSQFS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgataacaataagttcacttacacactcggcaaagagtgcggatagttacgcttacgac
aatacaacattacacattcgctttcgcagtgcaaaaggagaagtagacagagttgcattg
tggattggagacccttaccactgggctgaaggaggcttggatggtggcaaccttggtggc
agtgatgcacatggctgggttggcggcaatgaagttgaaatgaaattagaaggctcaaca
gagcatcatgaccattggttcgcggagttcaaaccaccaaaacttcgtagtcgatatggc
ttcattttatatggaaaagaaggtgaaaaactgctgtttggcgaaaagcgatgtgttgat
atttccactgatgaaagcgctgaaatagaactgagtaacctaagtaatttttactgtttc
ccgtatatcaatcctcgcgatgttctgaagacacctaagtgggttcaggaaaccgtgtgg
taccagatttttccagaacgctttttcaatggtaaacctgagatatccccacagaatgtt
cagccttggggaaccacaccaacagaaaccaactttatgggtggagacctttggggagta
atagagaaactcgattaccttcaggagttaggtgttaacggactctacttctgtccggta
tttaccgccaatgctaaccataagtacgatacagtcgactattttggtgttgatcctcat
tttggcggtaatgaagcctttaaagctctggttgatgaagctcataaccgtggtatgaag
gtcatgttagatgctgtgtttaaccatattggtgaccaacatccgatatggttagatgtg
gttgaaaacggtaaggaatcgagattcgcagactggttttggattaaagagtttccagta
tatccggatgttcccaaagaggagatcgatctatggaacttgaactatgagacattcggc
aatgttgctgaaatgccgaagctaaacacagagaatgaagagtgtcgccaatacctgtta
gatgtggcggagtattgggtaaaagagttcgatattgacggttggcggcttgatgtcgca
aatgaagtcgaccaggagttttggcgtgactttagacgcgtcgttaaaggcatcaatcca
gagtgttatattttgggtgagatatggcatgaaggtatgccgtggctgcgtggtgaacag
tatgattcactaatgaactaccctctgacacaagcaatgacagattactttgcgctgggt
acttatgacaaagagacctttatgaatgctgttacaagttcttatctctcttatcccaaa
aatgtcaacgaggccatgtttaacttgcttgagagccatgacactacaaggctaatcagc
ttatgtaatggagataaaaggaaagcgaagttagcttatttgtttatgtttactcaggtt
ggcgcaccatgtatttactacggtggtgaagtgggtatgcatggtcgtcgtggctggggt
aaagaagacaacagaaagtgcatgatatgggatgaatctgaacaagatctggatttcaaa
tcgtttatccagtctctaatacagctacggcatgagcatcccgaatttaatttaccggaa
atggcttggcttgaaatccagcatgaaagtgttgtcgcctatcgtaaagggagcatcatt
tttgtgctcaacaatagcgaatctctcgtcgaaatggagtatgaaggtgagaagcttacg
ctttccccttatgggttttccgttatcggttctcaattctcttag
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