Vibrio iocasae: SNR28_02885
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Entry
SNR28_02885 CDS
T11169
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vic Vibrio iocasae
Pathway
vic00300
Lysine biosynthesis
vic00470
D-Amino acid metabolism
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
vic01120
Microbial metabolism in diverse environments
vic01230
Biosynthesis of amino acids
Module
vic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SNR28_02885 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SNR28_02885 (lysA)
Enzymes [BR:
vic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SNR28_02885 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XHF82966
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All DBs
Position
1:631382..632665
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AA seq
427 aa
AA seq
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MTRPTEPVYYYQGELQMESCKIRSLAEKMTTPFYCYSEARLLDNVHRCKAAFEPRSIRVH
YAMKANSTLHILRLIAEQGVGVDLVSGGEMQRALSAGFAPQHMIFSGVGKSITELNTAIE
VGVGQFNVESAEELALLAKLAEQQNARVNVALRVNPDVTVNTHKNITTGQKGNKFGIDMN
RVAELSRQYAGNNHLTIEGLAMHLGSQLCDPEPYRIAIDKMMTMIEQLAQEGIEITRLDL
GGGFGIDYGQGSSLDFETIADLIAIETQNFKGTVIVEPGRSLVADTGVLVSRVNYVKEAE
PNTFVILDAGMNDLMRPALYQAVHPIITVAEPKGSFTKEYDIVGPICESTDTFVRDYPLS
DEIKAGDLVVFQYAGAYCSVMNSTYNSRTITPEIMLSGGDAKVIRQPISQQALMEFELDV
TSLQRQV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgaccaaccgagccagtttattactatcagggtgagttgcaaatggaatcctgt
aagattcgttcacttgccgaaaagatgacaacaccattttattgttattccgaggctcgt
ttattagataacgtgcaccgttgcaaagctgcttttgaaccaaggagcatacgcgtacat
tacgcaatgaaagctaatagcacccttcatattttacgtttaatcgctgagcaaggggta
ggtgtcgatcttgtctccggaggcgagatgcaacgtgctttatcggcgggttttgcccct
caacatatgatcttttcgggagtagggaaaagtattaccgagctcaacaccgccattgaa
gttggtgtagggcaatttaacgtggaatcagcagaggaattagctttgttggcgaagttg
gcggaacagcaaaatgctcgagtcaatgttgctttgagggtgaacccagatgtcacggta
aatactcataaaaacatcactacaggtcaaaaaggtaataagtttggtatcgatatgaat
cgagtggctgagctaagcaggcagtatgctgggaataaccacctgactatcgaaggcttg
gcgatgcatctcggttcgcagctttgtgatcctgaaccctatcgaatcgcgatagacaag
atgatgacaatgatcgaacagttggctcaggaaggaattgaaattactcgtctggatttg
ggtggcggttttggtattgactatggtcagggctcatccttggattttgaaaccattgca
gatctgattgcgatagagactcaaaattttaaggggaccgtgattgttgagcccggacgt
tctctcgtcgcggataccggagtcctcgtatcgcgtgtgaattatgtgaaagaagcagag
cccaacacatttgttattctggacgctggtatgaacgacctgatgcgtccggctttatat
caggcagttcaccctattatcaccgttgccgagccaaaggggagcttcactaaagaatac
gatatcgtcgggccaatttgcgaaagtaccgatacgtttgtacgagactatccgctaagt
gatgagataaaagctggagatctggtggtattccaatacgccggtgcttactgttccgtg
atgaactccacttacaacagccgcactatcactccagagataatgctgagtggtggtgac
gctaaagttattcgccagccgattagtcaacaagctctgatggagtttgaactggatgtc
acgtcgctacaacgacaggtatag
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