Vibrio iocasae: SNR28_03240
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Entry
SNR28_03240 CDS
T11169
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.8.1
]
Organism
vic Vibrio iocasae
Pathway
vic00010
Glycolysis / Gluconeogenesis
vic00020
Citrate cycle (TCA cycle)
vic00620
Pyruvate metabolism
vic00650
Butanoate metabolism
vic00720
Other carbon fixation pathways
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
vic01120
Microbial metabolism in diverse environments
vic01200
Carbon metabolism
vic01210
2-Oxocarboxylic acid metabolism
Module
vic_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SNR28_03240 (nifJ)
00020 Citrate cycle (TCA cycle)
SNR28_03240 (nifJ)
00620 Pyruvate metabolism
SNR28_03240 (nifJ)
00650 Butanoate metabolism
SNR28_03240 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
SNR28_03240 (nifJ)
Enzymes [BR:
vic01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
SNR28_03240 (nifJ)
1.2.8 With a flavin or flavoprotein as acceptor
1.2.8.1 pyruvate synthase (flavodoxin)
SNR28_03240 (nifJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
TPP_enzyme_C
Fer4
Fer4_16
Fer4_21
Fer4_9
Fer4_10
Fer4_6
Fer4_17
Fer4_8
Fer4_2
Transketolase_C
Fer4_15
INPP4A_C2
Motif
Other DBs
NCBI-ProteinID:
XHF83034
LinkDB
All DBs
Position
1:complement(713543..717109)
Genome browser
AA seq
1188 aa
AA seq
DB search
MDISKLFESETRIVDGNEAAASIAYRCNDVIGIYPITPSSPMSEQCEEWANQSQTNFRGV
VPDIYEMQSEAGAAGLLHGALTAGSLATSFTSSQGLLLMIPNMYKIAGELTPFVLHVAAR
TVATHALSIFCDHSDVMGVRQTGFAMLAGNNVQQAHDFALIAQAATLKSRIPFVHFFDGF
RTSHELNHIDYISNYLIKQMLDKDAIIQNFNRRLTPDNPTLKGTSQNPDTYFQAREAVNR
YYDACPEIVVEMMEKFGELTGRHYQPFEYHGHPQADDVIVVMGSTTSTVNQVVETYLKED
KKVGVLCVHLYRPFSIEHCIKSIPSTTRRIAVLDRTKEPGAIGEPLYLDMVSAISSAWST
YHITSAPVVYGGRYGLSSKEFTPAHVETIYSYMEQGSLFHNFTIGITDDVTHRSLSVQTS
SRSYKEARLNALFYGLGSDGTVGANKNTIKITGNNSDWFTQGYFVYDSKKSGGMTTSHLR
FDTSLIDAPYLIEKADFIGCHQFSLFKNNDILAKAKVGATILFNSAYGPEVLWQKLQHRE
QGHILAKQLKVYTIDATRLANEQSIRGRINNIMQRAFFLLTDIFDADKALNLQQQAITKT
YRNKGEKVVKANHDAVVKTASALFEVTPNPEQLNEAVSLHSKTIRTPEFVRKVTAELLHN
RGDLIPVSAFPEDGQWPTATSQWEKRDIASFVPDWDPESCTQCNICSLVCPHSAIRVKVI
SNTLLLDDAPDSFKVTDYKLRDFQGERFTLQVSPKDCTGCQLCAEMCPAMREEHSVQNGQ
VLGALEMVSRESVPSEQQDNFEYLTKLPELKPIDIKRIDARSSQLLEPLLEFSGACSGCG
ETPYIKLITQLYGDHMLIANATGCSSIYGGNLPTTPYTQNAEGQGPAWSNSLFEDNAEFG
LGMRMAVDSETDIALEQLESIKPELPEVLYLDLISLAKDSSAKGIDKQRKNVAELKQLMP
ENHPIQQHADSLVAKSVWILGGDGWAYDIGFGGLDHVLAGDKNVNIVVLNNQVYANTGGQ
QSKATPTGAIAKFASEGKQIAGKDLGLTAMINGSAYVATVAMGANMNQTLKAIQEAESYP
GPSIIIAYASCITHGINMSEGIEQQKELVASGLWPLYRFDPRRKAKGKAPLQLDSRPAKQ
GVAEFVTLQNRFNQLSTKDHQSFEQGITSLQFQVEYKQTLLNQLAEWK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggatatatctaagctatttgagagcgaaacaagaattgtcgatggcaatgaagctgct
gcgtctattgcctatcgctgcaacgatgtcattggaatctaccctattactccatcttcc
ccgatgtcggaacagtgtgaagagtgggccaatcaaagccagactaatttccgtggcgtt
gttcctgacatctacgaaatgcaatcagaggccggggctgcggggcttttacacggagcg
ctaactgctggctcgctggcaacatcttttacatcatctcagggtttacttttgatgatc
cctaatatgtacaaaattgccggagagttaaccccattcgtattacatgtagctgccaga
actgtagcaacacacgctctctcgattttttgtgaccactcggatgtcatgggtgtcagg
cagaccggttttgccatgttggccggcaataatgttcaacaagcccacgactttgcgctt
atcgcgcaggccgcaacgctcaaaagcagaataccttttgttcacttcttcgacggtttc
agaacttctcacgagcttaatcatattgattacattagtaactatctgattaagcaaatg
ttagacaaagacgctatcattcagaactttaatcgacgattaacgccagacaaccctaca
ttaaaagggacttcgcaaaatccggatacctattttcaggccagagaagcagtcaatcgc
tactacgatgcttgtccggaaatcgttgttgaaatgatggagaagtttggtgagttgact
ggccgtcactaccagccttttgaataccatggtcacccgcaagcagatgatgtcattgtg
gtgatggggtctacaaccagtaccgttaatcaggttgtagagacgtaccttaaagaagat
aaaaaggtcggcgttctttgtgtccatctttatcgtccattctcaatcgagcactgtata
aagtcgataccctctacgacaagacgtatcgcagtattggatcgcaccaaggagcccgga
gcgattggagaaccactctatcttgatatggttagcgcaatatccagtgcgtggtcgacc
tatcacatcacgtcagcgcccgtcgtatatggaggcagatacggcctttccagcaaagag
tttacgccagctcatgttgagacaatctactcgtacatggaacaaggcagcctgttccat
aacttcaccatcggtatcacggatgacgtaactcatcgttcactctctgttcaaacctct
tcccgtagttacaaagaagccaggctgaacgctctgttttatggattgggctctgatggc
accgtaggtgcaaataaaaacaccattaaaataacgggcaacaacagtgactggtttact
cagggctactttgtttacgattctaaaaagtccggaggtatgacaacctctcaccttcgc
tttgatacatcactcatcgacgcaccttatctgatagagaaggctgactttattggttgc
catcaattcagtctgtttaagaacaacgatattctcgctaaggccaaggtcggagccacc
atactctttaactctgcatatgggccagaggtactctggcagaagttgcagcatagagag
caagggcacattctggctaagcaacttaaggtttataccatcgatgccacccggctcgct
aacgaacagagtatacgcgggcgaatcaataacataatgcagagagccttcttcttgctt
actgatatatttgatgctgataaggctttgaatcttcagcaacaagcgatcactaaaacc
taccgcaacaaaggtgaaaaggtagttaaagcgaatcatgatgccgtcgttaaaaccgcc
agtgctttgttcgaagtgaccccaaatcctgaacaacttaacgaagcggtatcacttcat
agtaagaccattcgcacacctgagttcgtacgcaaggtaactgccgagctgttacataac
cgtggcgatctaataccggtcagtgcgtttccggaagatggtcagtggcctacggcaacc
agccaatgggaaaaaagagatattgcctccttcgtaccagactgggatcctgagtcctgt
acacagtgcaatatctgtagtttagtctgtcctcactccgcaattcgggtcaaagtgatc
agcaatacactgctactggatgatgcaccagattccttcaaggtgaccgattacaagctg
cgtgattttcagggagaacgatttacgcttcaggtatcgccaaaagattgtaccggctgt
cagctatgtgcagaaatgtgtcctgctatgcgagaagaacacagcgttcaaaatgggcag
gtgttaggagcactagagatggtgtccagagaatcggttccatcggaacagcaagataac
tttgaatacctcaccaaactacctgaattaaagccaattgatatcaaacgcatcgatgcc
cgaagcagtcagcttctggaacccttgcttgagttttccggagcctgctcaggatgcggt
gaaacgccttacataaagcttattacgcagctctatggcgaccatatgttgatcgccaat
gcgacgggttgttcttccatttatggagggaacttgccaacaacgccgtacacccaaaac
gctgagggtcaggggcccgcctggtcaaactcactgtttgaagacaatgctgagtttggt
ctgggtatgagaatggcagtggacagcgaaactgatattgctctagagcaactggaatcc
atcaagccagagctcccggaagtgctttatcttgaccttatctcgctggcaaaagactcg
tctgcaaaaggcattgataaacagcgcaagaacgtagccgagttaaaacaattaatgcca
gaaaaccacccaatccaacaacatgcagattcactggtagcaaagagtgtctggatatta
ggtggtgacggctgggcctatgacataggttttggcggtttggaccacgtattggcggga
gacaaaaacgtcaacatagttgtcctgaacaatcaggtctatgcgaatacgggtggacag
cagtccaaagcgacaccgactggtgctattgccaagtttgccagtgaaggcaaacagata
gccggtaaagaccttggtttaaccgccatgatcaatggcagtgcttacgtggctactgtc
gccatgggcgcaaatatgaaccagacattaaaagcgattcaagaagcggaatcttatccg
ggaccttcaatcatcatcgcctacgcctcttgcatcacacacggtatcaatatgtctgaa
ggtatcgaacagcaaaaagaactggtcgctagtggtttgtggcctctataccgatttgat
cccaggagaaaagcgaaaggtaaagctcctcttcagttagattcccgtccggccaaacag
ggcgtagctgagtttgtgacactgcaaaacagatttaaccaactttcgaccaaagaccat
caaagctttgaacaaggcatcacctcactacagtttcaggttgagtataaacaaacacta
cttaaccagcttgctgagtggaaatag
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integrated database retrieval system
