Vibrio iocasae: SNR28_03315
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Entry
SNR28_03315 CDS
T11169
Name
(GenBank) choline dehydrogenase
Organism
vic Vibrio iocasae
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GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
DAO
Lycopene_cycl
NAD_binding_8
Pyr_redox_2
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
XHF83049
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Position
1:731621..733282
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AA seq
553 aa
AA seq
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MERYDYIIIGGGSAGCVLASRLTEDEAISVCLLEAGGKDDSAIIHTPTGIIAMLPTKINN
WAFETVPQPGLNGRKGYQPRGKTLGGSSSINAMMYARGHKYDYDLWASLGNEGWSYDECL
PYFKKAENNEELKDEFHGQGGPLNVANLRSPSPMLDRYLDACEEIGIPRSPDVNGAEQFG
AMQTQVTQVNGERCSAAKAYLTPNLDRPNLTVVTKATTHKVLTEGKRAVGVEYGSKGKVF
RIYSNREVILSAGAFGSPQILQLSGIGDKADLEPHGIELVHHLPGVGKNLQDHIDLVHTY
KTSAKKETFGVSLQMFNETRKAWPEWRKERKGKLTSNFAEGIAFLRSGDEVDVPDLEFVF
VVAVADDHARKIHVSHGFSCHVTLLRPKSRGSVTIQSSDPYQAPVIDPNFFGHPDDMPVM
IEGWKKQYQMMESSAFDDVRGENFYPVDPNDDKAIEQDIRNRADTQYHPVSTCKMGPKED
EQAVVDNQGRVYGIEQLRVIDASIMPTLIGANTNAPTIMMAEKIVEQIKQDHLCGRVDLT
VHRDQSPTSRDFL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcgttacgattacattatcattggtggaggctcagcaggttgtgtgctggcttca
cgtcttaccgaggatgaagctatttcagtatgcctgctagaggcaggtggcaaagatgac
agtgccattatccacacaccaacggggataattgccatgttgccgactaaaattaacaat
tgggcatttgaaacagtgccacagcctggtctcaatggacgtaaagggtatcaacccaga
ggcaagactttaggtggttcaagctcaattaacgcgatgatgtatgctcgtggccataag
tatgattatgatctttgggctagcttgggtaacgaaggctggagctacgatgagtgtttg
ccttatttcaaaaaggcagaaaataacgaagagctgaaagatgagtttcatgggcaaggt
ggtccgctgaatgtagctaatctgcgctcaccaagtccaatgctcgaccgctaccttgat
gcctgtgaagagataggcattccgcgcagtcctgatgtgaatggtgctgagcaatttggt
gcaatgcagacccaagtaactcaggtaaatggtgagcgttgcagtgccgcgaaagcttat
ctcacccctaatctagaccgccctaacttaactgtggtaactaaagccaccacacataaa
gtgttgactgaaggtaagcgtgcagtcggtgtggagtatggctcaaaaggcaaggtattc
cgcatctattctaatcgagaagtgattttatctgcgggagcatttggctctccgcaaatc
ttgcaactttctggtattggcgataaagccgatcttgagccacacggcattgagctggtt
caccatcttcctggtgtagggaagaacttacaagatcacattgaccttgtgcacacctat
aaaacctcagccaaaaaagaaacgtttggtgtttcactacaaatgttcaatgagacccgc
aaagcctggcctgagtggcgcaaagagcgtaaaggcaaactgaccagtaactttgctgaa
ggcattgcttttttacgctccggcgatgaagtagatgtgcctgacctggagtttgtcttt
gtggtcgccgttgctgatgaccatgcaagaaaaattcatgttagccatggattcagctgt
catgtgacacttctaagacctaagagtcgcggcagcgttaccatccaaagtagcgaccct
tatcaagctccggtgattgatcctaacttcttcggacacccagatgacatgcctgtaatg
atcgaagggtggaaaaagcagtatcaaatgatggagagctcagcctttgatgatgtgcga
ggtgagaacttctatcctgttgatcccaatgatgataaggcgattgagcaagacatccgt
aatcgagccgatacccagtatcacccagtcagtacttgtaagatgggcccaaaagaggat
gagcaagcggtagtagataatcaaggtcgagtctatggtattgagcaactgcgagtcatt
gacgcttctattatgccaaccctgattggtgcaaataccaatgccccaaccattatgatg
gcagagaagatcgttgaacaaatcaaacaagaccatctgtgcggtcgagtggatttaacg
gttcatcgtgaccaaagcccaactagcagggattttctctag
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