Vibrio iocasae: SNR28_03935
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Entry
SNR28_03935 CDS
T11169
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_03935
Transporters [BR:
vic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SNR28_03935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_22
AAA_21
RsgA_GTPase
AAA_29
ABC_ATPase
AAA_16
AAA_5
AAA_30
AAA_PrkA
nSTAND1
AAA_18
nSTAND3
AAA_23
CrAss_Ring_1
MPC
AAA_33
Rad17
Motif
Other DBs
NCBI-ProteinID:
XHF83169
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All DBs
Position
1:876225..877985
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AA seq
586 aa
AA seq
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MINKNSKNLSILLNLLVFVRPYKTRAFAALAALILTAAMTLSIGQGVRMLIDSGFAERSH
EQLQLAVVFILVLTSLIAAGTYARFYLVSWLGERVSADIRVAVFNHTITLPPDYFESKGS
GDVMSRLTTDTTLLQSIIGSSFSMAMRSALMFVGAVIMLFATNIKLTLVVLISVPFILVP
ILFYGRRVRALSRQSQDSMSDVGSYAGEAIEHIKTVQSYTREEQERASFIIEVEKAFQIG
RKRVQQRATLIAGVIIIVFGAITGMLYIGGSDVISGVMSGGELGAFVFYAILVASSLATI
SEVLGELQRAAGAMERLIELLEIKSNITPPESGGESAEGLIAEVEFKEVCFNYPSRSDQP
ATDNLTLKAEQGKVLALVGPSGAGKSTLFELLQRFYDPKSGVVALGGKDIRDFSPEVLRS
KMALVPQQPALFSSDVFHNIRYGKPDATEEEVIEAAKKANAHEFIVDLPEGYKSFLGDKG
VRLSGGQKQRIAIARAILKDPEILLLDEATSALDSESEFKVQKALEVLMRDRTTLIIAHR
LSTIQHADKIAVLDNGRLVDFGDHSSLMKSSELYSRLVELQFKSLQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgataaataagaatagtaaaaacctgtcaattctacttaatttgctggtctttgtacgc
ccgtataagacgcgagcatttgcggctcttgcggccttgattctgaccgctgcaatgaca
ctttcgataggtcagggtgtcagaatgttaattgactcgggtttcgccgagcgctctcat
gaacaacttcagctcgcagtagtgtttattttggtgctaacaagcctgattgctgcagga
acttatgctcgtttttatctggtgtcatggttaggtgagcgtgtgagtgcagatattaga
gtggctgtctttaaccatactattacgcttccaccagactactttgagtcgaaaggaagt
ggtgatgtgatgtctcgcctaacaacagatacgacgctgctgcaaagtattatcggttct
tctttttcaatggcgatgcgtagtgcactgatgtttgttggtgcggttatcatgttgttt
gctaccaacataaagttaacgttggtggtgctgatttctgttccctttattctggttcca
attcttttttatggccgaagagtgagggctttgtctcgtcagagtcaggattcgatgtcg
gatgtcggcagttacgcgggtgaagcgatagagcatattaaaacggtacaaagctatacc
agagaagagcaggaacgcgcatcatttattatagaggtagagaaagcatttcagattggc
agaaagcgggtccagcaacgagcaacgcttatcgctggagtgattatcattgtgttcggt
gccattacaggaatgctctatattggcggtagcgatgttatttctggtgtgatgagtggt
ggtgagcttggggcttttgtgttctatgccattcttgttgcttcctcgttagcgacaatc
tctgaggtgttgggtgaactccagcgtgcagctggtgctatggaacgcttgattgagctt
ttggaaataaaaagtaatatcacgccacctgaatctgggggtgagtcggctgaagggctg
atagccgaggtcgagttcaaagaggtttgctttaattacccatcgcgttccgatcaacca
gcgacggataacctgacgttaaaagcagagcaagggaaagtattggctttggtggggcca
tctggtgccgggaaatctacattgttcgaacttcttcagcgcttttacgatcctaaatca
ggagttgtggcactgggtggaaaagacattcgagactttagtccggaggtattgcgttca
aaaatggcgctagtgccacaacagcccgcgctttttagtagcgatgtctttcacaacatt
cgttatgggaaaccagatgcgacggaagaagaagtcatcgaagcggcaaagaaagccaat
gcacatgagtttattgtggatttgccagaaggttataaaagctttctgggagacaaaggg
gtaagactttctggcgggcagaaacagcggattgcgattgcccgagcgatactcaaagac
ccggaaatccttttgttggatgaagcaacaagtgctttagacagtgaaagtgagttcaag
gtacaaaaggcactcgaagtactgatgagagacagaacaacgctgattattgcccacagg
ctttcaacaattcaacatgcggataagatagcggttctggataatggacgcttagttgat
tttggtgatcacagttcactaatgaaaagcagtgagttgtacagtcggctggtggaattg
cagtttaaaagtctgcagtaa
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