Vibrio iocasae: SNR28_03985
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Entry
SNR28_03985 CDS
T11169
Name
(GenBank) PLP-dependent aminotransferase family protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vic03000
]
SNR28_03985
Transcription factors [BR:
vic03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SNR28_03985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Rrf2
HTH_11
MarR
HTH_36
Fe_dep_repress
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XHF83178
LinkDB
All DBs
Position
1:889144..890565
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AA seq
473 aa
AA seq
DB search
MQPIDCGDLSLSHNKSSKQEALFHAVREKIVSGLWPKEGKLPSSRKLAEELSVSRNTVTL
VYEQLVAEGYIHSRRGSGFFVSVDLPEQFLGINKIDAKPERDAIATRINAPFAPGVPDLQ
KFPFMKWQKMVQKHMLRPILLGNQNIQGDKALRAALADYLSSSRSVKCHPGRIIITSGAQ
QALSIAAMATLHLSDSILIEQPGYTQIRKVIDLLKLNERPLHVEPKEGIDIDGVIASDAK
ALYVTPSNQYPMGTTLDTEQRLKLIEWSKKNRSWIIEDDYDSEFQFAHRPYTSLQGLAGQ
LDRDARVIYVGSFSKVMFNGLRIGYMVVPDSLVARCLEVKDALSGDTPSHVQAALADFIS
EGHLLRHIRMMRRLYKQKYELMVSAVKRHFGDLVDIISQPAGLHITLKWHAGVDENVFVE
RAKEVEIIVRALNYYERKDAIQRDWSGVVLGFGNIAIEDIDSRMADLAQLFQD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgatagattgcggggatttgtctctttcgcacaataaaagctcaaaacaagaa
gcgttgttccatgctgttcgggagaaaattgtatctggtttatggccaaaagaaggtaaa
ttgccctcttcgagaaaacttgccgaggagttgtctgttagccgaaacactgtcactctg
gtgtatgagcaactggtagcggaaggttatattcacagccgaagaggttccggttttttc
gtttcagtcgatttgccagagcagtttctggggataaataaaatcgacgcgaaacctgaa
cgtgatgcgatagcaactagaataaatgcaccgtttgctccaggagtgcctgatttacaa
aagtttccttttatgaagtggcagaaaatggtgcaaaagcacatgctgcggcccatactg
cttggaaatcaaaacatccaaggggacaaagcattgcgtgcggctctcgcggattatctt
tcttccagcaggtcagttaaatgtcatcccggcaggatcatcattacttcgggagcccaa
caagctctttcaatcgctgcaatggcaacacttcatctatctgattcaattcttattgag
caaccaggctatacgcaaatacgaaaggtgattgatcttttaaaactgaatgagcgtcca
ctacacgttgaacctaaagaaggcattgatatcgacggtgttatagcgagtgatgcgaaa
gcactttacgtcactccgagcaatcaatatccaatgggaacaacgcttgatacggaacaa
cgactcaaacttatcgaatggtcgaaaaaaaaccgtagctggattattgaagacgattac
gatagtgagttccagtttgcacatcggccatacacaagtttacaaggcttggctgggcaa
ttagacagagacgctcgtgttatatacgtcggctcttttagcaaggtcatgtttaatgga
ttgagaattggatacatggttgtgccggattctttggtggcgagatgtttagaagttaaa
gatgctttatcaggcgatacaccgtcacatgttcaggcggcactcgccgattttatcagc
gaagggcatctgctcagacacatcagaatgatgcgtagattgtataaacagaaatacgag
ctgatggtaagtgcggttaaacgccactttggagatctggttgatatcattagccaacca
gcaggtctgcatataacactgaaatggcatgctggtgttgatgagaatgtctttgttgaa
agggcgaaagaagtcgaaattatcgtccgtgcactaaattattatgaaagaaaagacgcc
attcaaagggattggagtggcgtagttttagggtttgggaatattgccatagaggatatc
gactccagaatggcggatcttgctcaattatttcaagactaa
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