Vibrio iocasae: SNR28_03995
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Entry
SNR28_03995 CDS
T11169
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vic Vibrio iocasae
Pathway
vic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SNR28_03995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_03995
Transporters [BR:
vic02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
SNR28_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
XHF83180
LinkDB
All DBs
Position
1:complement(892986..894023)
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AA seq
345 aa
AA seq
DB search
MPLVPLVSTFVISMLLSVHSIAGEVKIFTWEDYFSPTIIRAFEDQYGHTVNQTFFESEML
RDQVLLSKKAELYDLIIVDNHTITTLTGKDVLREFAPSLLGDTSQYTSTSLKACDKYGIP
FSFGSMGIGYRNSKVSQPIKSWRDLLEFAKNNPGTVVLPDEDVDTLVIALLALGHDPMTS
NKEHLKEAYHLLESIIDKLLVFRTTIGYALEKGINSKMEAAVFYSGEKEAISQATSQDDW
EYILPEEGTLMWFECLSAHKNKSLSNATIDFLEFISTPEVAAANAEEFWFATSNKSALQY
TSTHYRNDSELYPAGLTTKKIYYYELLDDESMRLRANIVNSLSKR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcctctagttccattggtatcaacctttgttatctcaatgctgttgagcgttcactcc
atcgctggtgaagtcaaaatctttacttgggaagactacttctcacctaccattatccga
gcgtttgaagaccaatatggacatacggtcaaccagacctttttcgaaagcgaaatgcta
agagatcaggtattgctttcaaagaaggcagagctctatgacttaatcattgttgataac
catacaatcaccactcttactggaaaagacgtactaagagagttcgctccttctctttta
ggagacaccagtcaatatacttcaacctcactgaaggcgtgtgacaaatacggtattcct
ttttcttttggctcaatgggtattggataccgaaactcaaaggtgtcacagcccattaaa
tcctggagggacttattagagtttgcaaaaaacaacccggggactgtagtgctgccagat
gaagacgtggatacgctggtcatcgctcttttagctttgggacacgaccccatgactagt
aacaaagagcatctaaaagaggcgtatcatttgctcgagagtatcattgataaattacta
gttttcagaaccacaattggttacgcccttgaaaaaggaattaactccaagatggaagca
gctgttttttactcaggagagaaagaggctatatctcaagcaaccagccaagatgattgg
gaatacattctaccagaggaaggaactttaatgtggtttgagtgcctttcagcgcataag
aataagtccttaagtaacgcaaccattgattttctagagtttatttctactcccgaagtt
gcagctgctaatgccgaggagttttggttcgcaacgtctaataaaagtgcacttcaatac
accagtactcattatagaaatgatagcgagttgtatcccgctgggttaactactaaaaaa
atatattactatgagctccttgacgacgaatcgatgagactaagagcgaatattgttaat
tctttatctaagcgataa
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