Vibrio iocasae: SNR28_05485
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Entry
SNR28_05485 CDS
T11169
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
vic Vibrio iocasae
Pathway
vic00362
Benzoate degradation
vic00620
Pyruvate metabolism
vic00650
Butanoate metabolism
vic01100
Metabolic pathways
vic01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
SNR28_05485
00650 Butanoate metabolism
SNR28_05485
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SNR28_05485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_05485
Enzymes [BR:
vic01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
SNR28_05485
Transporters [BR:
vic02000
]
Other transporters
Primary active transporters [TC:
3
]
SNR28_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Acyl_transf_3
Motif
Other DBs
NCBI-ProteinID:
XHF81644
LinkDB
All DBs
Position
1:complement(1214954..1216258)
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AA seq
434 aa
AA seq
DB search
MESALALINDFGFLHLQWGQAIMILVGMVLLYLAIVKQFEPLLLVPIGLGGILSNLPDAN
LAISAVEAAIHAGQADVMQSFASILNISDTAPKVIKEAYALATPEQKLNLHLLAEQYKYS
DGMLYTFYSVAIASGVGPLVIFMGVGAMTDFGPLLANPKTLLLGAAAQFGIFATVLGALA
LSQFGIMDFSVAQAAAIGIIGGADGPTAIYVSSMLAPELLGAIAVAAYSYMALVPMIQPP
IMKALTTEAERKIEMKQLRQVSKIEKVCFPLMLLILIAMLLPSATPLLGMFCFGNLMREC
GVVERLSDTAQNGLINIVTIFLGLSVGSKLMADKFLQPQTLGILALGIAAFCVGTAAGLL
MAKLMNKVFEEKVNPLLGSAGVSAVPMAARVSNKIGLEANPQNFLLMHAMGPNVAGVIGS
AVAAGVMIKYVLGG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgcgttagctcttataaatgactttggcttcctgcatttgcagtggggccag
gccatcatgatattggtgggtatggtgcttctctatcttgcgatagtgaagcagtttgaa
cccttactgcttgtgccaatcggtttgggcgggattctttcgaacctgcctgatgcgaac
ctggctatcagcgcggtagaagccgcgatacatgcaggtcaggctgatgtaatgcagtcg
ttcgcatctattctgaacatctcagatacggctcctaaggtaattaaagaggcttatgcg
ctggcgactccggagcagaagctgaatcttcatctacttgcagagcagtacaaatactca
gacggaatgctttataccttctacagtgttgcgattgcatcgggtgttggtccgttagtg
atcttcatgggcgttggtgcaatgacggattttggtccgctacttgcgaaccctaagacg
ttgctactcggtgctgcagctcagtttggtatcttcgcgactgtgcttggcgcactggca
ttgagtcagtttggcattatggactttagcgttgcgcaggcagcggctatcggcattatt
ggcggtgcggacggcccgacagcgatttatgtttcaagcatgcttgctcctgaattactt
ggtgctattgcggtcgctgcatactcatatatggcgctggttccgatgatccagccacca
attatgaaagcactgacaacagaagcagaacgtaagattgagatgaaacaacttcgtcag
gtgagcaagatagagaaagtatgcttcccgctgatgcttctcattctgattgcaatgctt
cttccgtcagcaactccgctactgggcatgttctgcttcggtaacctgatgcgcgaatgt
ggcgtggtcgagcgtctgtctgatactgctcagaatggtctgatcaatattgtgactatc
ttccttggcttgtcggttggttctaagctgatggcagataagttcctgcagccacaaacc
ctaggtattctggctttgggtattgcagcgttctgtgttggtactgcggccggtttgctg
atggccaagcttatgaacaaagtctttgaagagaaagtgaatccattacttggttctgcc
ggggtatcggcggtaccaatggcggctcgtgtatctaacaagattggtcttgaagcgaac
cctcaaaacttcttgttgatgcatgcgatggggccaaacgttgcaggtgttatcggatct
gcggtcgcagcaggtgtgatgattaagtatgtattgggtggctaa
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