Vibrio iocasae: SNR28_05890
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Entry
SNR28_05890 CDS
T11169
Name
(GenBank) efflux RND transporter permease subunit
KO
K07787
copper/silver efflux system protein
Organism
vic Vibrio iocasae
Pathway
vic02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SNR28_05890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_05890
Transporters [BR:
vic02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SNR28_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
XHF81722
LinkDB
All DBs
Position
1:1311984..1315109
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AA seq
1041 aa
AA seq
DB search
MIPAIIRWSLNNRFVVLVFTLFLVFAGLFSVKNTPVDALPDLSDVQVIIKTSYPGQAPQV
VEDQVTYPLTTAMLAVPGAETVRGYSFFGDSYVYIIFNDDTDMYWARSRVLEYLSQVAPN
LPADAKPTLGPDATGVGWVYSYVLQDKTGQHDLSELRSYQDWFLKYELQTVDGVSEVATV
GGMVKQYQIQIDPAKLRAYDLTLQQVNNAIKMGTQETGASVIEVAEAEHMVRTTGYLSGI
EDIKALPLKVTEKGTPLLLGDIADINLGPQMRRGISEFNGEGEAVGGVIVMRFGENASEV
IANVKQKLSELQSSLPEGVEIVATYDRSTLINKAVENLWEKLAEEFIVVAIVCALFLFHI
RSSLVIALSLPVGILSAFIVMHWQGINANIMSLGGIAIAIGAMVDGAIVMIENVHKHIER
TPLTDKNRWQVIGKAAEEVGAPLFFSLLIITLSFVPVFALEGQEGKMFSPLAFTKTYAMA
AAAGLSITLVPVLMGYLVRGKILPEHKNPVNRLLIALYKPVLNVSLKYPKSMVLIALILM
SSAYIPITKMGSEFIPPLDEGDLMYMPTTYPGISIGKARELLQQTNKLIKTVPEVATVWG
KVGRAESATDPAPLTMIETVIQLKPKEEWREGVTTDSLRQEFDNLIQFPGLTNAWVMPIK
TRIDMLSTGIKTPIGIKIAGPDLKVIEDIGAELEPILNNIEGTASVYAERVAGGRYVAID
IKRRQAARYGLSIKQIQQVISTAIGGMNVGETTEGLERYPINVRYPQVYRDSIEKLQSLP
LVTPSGARIALTDVADVRFEDGPPMIKTENARPNGWVFVDIAERDLGSYVAEARQAVSDQ
LALPAGYSLAWSGQYEYMERAKARLSIVTPVTIAIIMLLLYFSFRRVGEVMIIMLTLPLA
MVGGLWLMHYLNYNFSIAVGVGFIALSGVAVEIGVIMLVYLNQAWHHRKLDLMEDKQPLT
SQDLKESIIEGAGLRVRPIMMTVLTVIIGLIPIMQGSGTGSEVMQRIAAPMIGGMASAIV
LTLLVLPAIFKLWKQREVNKQ
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgccattatcagatggtctctgaacaatcgatttgttgttctagtgtttact
ttgtttttagtctttgccgggttgtttagtgttaagaacacgcctgttgatgcactgccg
gatctttcggatgttcaggtcatcatcaagacaagttatccggggcaagcaccgcaagtt
gttgaagaccaagtgacatacccgttaacgacagccatgctggccgtaccgggtgcagaa
acggttcgtggctattcgttcttcggagattcctatgtttacatcatcttcaatgatgat
acagacatgtactgggcccgatccagagtactggagtatctaagccaggttgcaccaaac
cttcctgccgatgccaaaccgacacttgggccagatgctacgggtgtgggctgggtatac
agctatgtgcttcaggacaaaacggggcagcacgatttatccgagcttcgtagctatcaa
gactggtttttaaaatatgaactgcaaacggtcgatggggtgtctgaagtggctaccgtt
ggtggcatggttaagcaataccaaatacagattgaccctgccaaattgcgcgcttacgac
ctgacgctacagcaagttaataacgcgattaagatgggtactcaggagacaggtgcatcg
gtaatcgaagtggccgaagctgagcatatggtgcgaacgacgggctacttatccggtatc
gaagatatcaaagcactcccactcaaggtaacagagaaaggaaccccgttattactgggc
gatattgccgacatcaatctgggaccgcagatgcgtcggggtatctccgagtttaatggt
gaaggtgaagctgtcggtggtgttatcgtgatgcgttttggtgagaatgccagcgaggtt
atcgccaacgtaaaacaaaagctttcggagcttcagtccagcctgcctgaaggggttgag
attgttgctacttatgaccgttcaacacttatcaataaagcggtcgagaacctgtgggag
aagctggctgaagagtttatcgtggttgcgattgtatgtgcactcttcctgtttcatatc
cgctcgtcgttagtcattgcactcagcttgcctgtgggtattttgtctgcctttatcgtc
atgcattggcagggcatcaacgccaatatcatgtcacttggtggtatcgctatcgccatt
ggcgccatggtcgacggggctatcgtgatgatagaaaacgtgcataagcatattgaacga
accccgttaacagacaaaaaccgatggcaggtaattggaaaagcggctgaggaagtgggc
gctcccctattcttctcgctgcttatcattacattgagttttgttccggtattcgcgctc
gaagggcaagaaggcaaaatgttctcgccactggcatttaccaaaacctatgccatggcc
gcagctgcgggcttgtccatcactctggtgcccgtattgatggggtatctggttcggggg
aaaattctacctgagcataagaacccggttaaccgacttcttatcgccttgtataaaccc
gtgctcaatgtcagcctcaaataccctaagagcatggtacttatcgcgcttatcctgatg
tcatctgcgtacatccctatcactaaaatgggtagcgagtttatccctcctctagacgaa
ggagatctgatgtatatgccaacaacctatcccggcatttccatcggtaaggctcgtgag
ctcttgcagcagaccaacaagcttattaaaaccgtacccgaagtggcaacagtctggggc
aaagttggacgagcagaaagtgcgacagacccggctccgctgaccatgattgagacggtt
attcagctaaagccgaaagaggagtggcgtgaaggcgtcacaacagattctctaaggcag
gagtttgacaacctaatccagttccccggtttaaccaacgcatgggtcatgccgatcaaa
acccgtatcgatatgttgtcgacaggtatcaaaacacctatcggaataaaaatcgcgggt
ccagacctgaaagttattgaagacattggcgcggagctggagcctattcttaataacatc
gaaggcacagcctcagtctatgctgagcgtgtcgccggtggccgatatgtggccattgat
atcaaacgcagacaggccgcccgttatggcctgagtatcaaacagatccagcaggttatc
tcaaccgcgataggtggcatgaacgtgggcgaaacaaccgaaggtctggagcgttatccg
attaatgttcgctatcctcaggtataccgagattccattgagaaactgcaaagccttcca
ctggtgacaccaagcggagcacgtatcgcactcacggatgtggcggacgtccgttttgaa
gatggccctcccatgattaaaaccgaaaatgcacgccctaacgggtgggtgtttgtcgat
atcgctgagcgagatcttggttcatacgtcgctgaagcaaggcaagcggtatccgatcaa
ctggcgttgccagcaggttattccctcgcctggtccgggcaatatgaatatatggaacga
gcaaaagcgcggcttagcatcgtcacaccagtgaccatcgccatcatcatgttgcttttg
tatttcagcttcagacgcgttggcgaggtcatgatcatcatgctcactctgcctctggcg
atggtgggtggactctggttgatgcactacctgaactacaacttctctattgcggtcggt
gtgggctttatcgccctgtctggtgtggcggtagagataggcgtcatcatgctggtttat
ctcaatcaggcatggcatcaccgaaaacttgatttgatggaagacaaacagcctttgact
tcacaagacttaaaagagtcgattatcgaaggggccggactgcgcgttcgccccatcatg
atgacggttcttacggtcattatcggtttaatcccaattatgcagggctccggaacaggc
tctgaagtgatgcaacgtatcgcagcacccatgattgggggaatggcttcggccattgta
ctcactcttctggttcttccagccatctttaagctctggaaacaacgcgaagtgaacaag
caatag
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