Vibrio iocasae: SNR28_08110
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Entry
SNR28_08110 CDS
T11169
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_08110
DNA repair and recombination proteins [BR:
vic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SNR28_08110
Archaeal homologous recombinant proteins
SNR28_08110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XHF82146
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Position
1:complement(1815908..1819612)
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AA seq
1234 aa
AA seq
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MKILSLRFKNLNSLKGEWKIDFTQSPFSENGLFAITGPTGAGKTTILDAICVGLYHKTPR
LENISASTNELMTRGTADCESEVEFEVKGKAYRAFWSMRRSRGKVDGNLQAAQVELAEVE
SGKVLANQVKKKSELVESITGLDFGRFTKSMLLSQGQFAAFLNAKESERAELLEELTGTE
IYSLISAKVYERFNQAKLTMAELEAKAQGVQLLTAEAIQELEQERADTLKKQTDQKTQSE
AQAAHLSWWEKVTKSQHDKHHFSLDLEHAHGEFDKAKPQLEKLANSEPADKLRAPYTMLQ
LANTQLSAEKEKLSEKQKSAVALQLRAEESEQSVGVLSKAYQEMRLTHAELEELLNNKVL
PLDIEIKGLHQGVKDLTQQKSGLDNELVQSKTLHGDNSAQLKQVETSLKEIQTYLDENRA
DSALSGSLQKWKEQLSQIDRAHQQAEDLKYQTQNQKKLLEQKQHTISDSETKNRDAVQRL
THKQAELATAEHELEALKAKASESQSDVPVELDGLEMQLQELNQKQALTHELQLYQNQWL
NLQKETSEKQTQIRQLNETLLTTQTDVTKLRESYKKQSDYIKVLDKLVSQEALLTQYRAE
LQSGEACPLCGSHDHPLIEQGNEVNVSEELEKKQKAEIELREIEAKGKESKINLDSLANR
ISEEEKRLKRSESELELLNSKWQEKSPLIQCMASIDDQPAFTTFVQNLEQQRIAKTELFT
LYRELREKLGRLKEESQLATQESQKAGNELQLQRQQVEHESHTLKSMEQRLHTAVVEQKN
LLEQLQKQIIEQGFNPEGELSEWIADKQDHLTRWQEMEAKRNELMPQKSALVESVSASEA
RISDLTKQLDELGQKLDATNKSMANASETRSALFGDKNPQQERERSQSQLKQTESEFNEA
QKLFTQAQGDVKAVSGETKTLESSVNELTKNAEERLEEWNIALIGSQFDSVSDFEAALLE
TEEKQQLTEQKQCLESAIEKAKTLVESTSKELERLMAVPQSREYQETTIDEVKEQSIETA
KTLEETTKRLGEVENELESDKQRREGQKALFEEIEAYREVYDDLQYLNSLIGSADGNKFR
KFAQGLTLDNLVYLANKQLTRLHGRYELQRGSGEGLELAVLDTWQGDVVRDTKTLSGGES
FLVSLALALGLSDLVSHKTSIDSLFLDEGFGTLDAETLDLALDALDSLNASGKMIGVISH
IEAMKERIPVQLKVMKKSGLGVSELDSRYRVSSR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttagccttcgatttaaaaacctaaactcactcaaaggcgagtggaagata
gatttcactcagtcccccttttctgagaacggattgtttgccattaccgggccaacgggt
gctggtaaaacgacgattttagatgcgatatgtgttggcctttatcacaagacaccaagg
ctggagaatatctcagcgtcaaccaatgaactgatgactcggggcaccgccgactgtgaa
tcggaggtggagtttgaggttaagggtaaagcctatcgggcattctggagcatgcgccgt
tctcgtgggaaagttgatggtaatttgcaggcagcacaagtcgaactggctgaggttgaa
tcaggtaaagtccttgcgaatcaagtaaagaaaaaatccgaactggttgaaagcattacc
ggactggattttggacgctttaccaagtctatgttgctctctcagggccaatttgcggct
ttcctaaatgccaaagaatctgagcgcgcagagctattggaagaactgacaggcacagaa
atttacagcctgatctcagccaaggtatatgagcgttttaatcaggccaagctcacgatg
gctgaattagaagcgaaagcgcagggtgttcagctattaacagcagaggctattcaggag
ttagagcaagagcgagcagatacgctgaaaaaacaaacggatcagaaaacgcaatctgag
gctcaggccgctcatctcagttggtgggagaaagtcaccaaatcacagcatgataaacac
catttctcgcttgatttggagcatgcgcatggtgagtttgataaggctaagcctcagtta
gagaaactggcgaacagtgagcccgcagacaagctgagagcaccttatacgatgcttcag
ctagcaaacacgcaactcagtgctgagaaagagaagctgagtgaaaaacagaaatctgcg
gtggctcttcaattgcgagcagaggagtcggagcagagtgtaggtgtgctttcaaaggca
tatcaggaaatgagactcactcatgctgagcttgaagaactgttaaacaacaaagttctg
ccacttgatatcgaaatcaaaggacttcatcaaggagtcaaggatcttacccaacaaaaa
tctgggttggacaatgaacttgttcagagcaaaacactgcatggtgataactcagctcaa
ctcaagcaagtagaaaccagcctgaaagagattcagacctatctggatgaaaacagagca
gacagtgccttatcgggtagcttgcagaagtggaaagagcagctatctcaaatcgacaga
gcacaccaacaggctgaagacctcaagtatcagacgcaaaatcaaaaaaagcttctggaa
caaaagcaacatacgatatctgactctgaaacaaaaaacagggacgcggtacaacgcctt
acgcataagcaggcagaactcgctacagcagaacatgagctagaggcattgaaagcaaag
gcatcagagagtcagtctgatgttcccgttgagttggatggtttggaaatgcagttgcag
gaactcaatcagaaacaggctttaactcatgaactgcaactttatcaaaaccagtggttg
aacctgcaaaaagaaacctcagagaaacagacgcaaatcaggcaattgaatgagactttg
cttactactcagactgatgtcactaaactcagagagagctacaagaagcagtctgattac
ataaaagtgctggataagctagtgagtcaggaagcattgctaacccagtatcgcgcagaa
cttcagtctggtgaggcttgtccgctttgtggatcccatgaccaccctctgattgagcaa
ggtaatgaagttaacgtatctgaagagctggagaaaaagcaaaaggcggaaatcgagcta
agagagatcgaagcaaaaggcaaagagtccaagataaatctggattcgcttgcaaatcga
atcagcgaagaagagaagcgtctcaagcgctctgaatcggagttagagcttctcaactcg
aaatggcaggagaagtcacctttgattcaatgtatggcatccatcgatgaccagccagca
tttaccacttttgtacagaacctggaacaacaaagaatagcaaaaaccgagttatttact
ttataccgagagctaagagaaaaactgggtcgcttgaaagaagagtctcagttagcgact
caggaatctcaaaaagcagggaatgaactgcaacttcagcgtcagcaagtggagcatgaa
agtcatacgctgaaatcaatggaacaacgtttacatactgctgtcgttgagcaaaagaac
ttacttgagcagctacaaaagcagatcatcgagcaaggatttaaccctgaaggtgaactc
tcagaatggattgcggacaaacaggaccatcttacgcgctggcaagaaatggaagcaaaa
cgcaatgagttgatgcctcagaaatcagcgttggttgagtccgtcagtgcatcagaagct
cgtatcagcgacctgacaaaacagcttgatgagctgggacaaaaactggacgcaaccaac
aagtccatggcaaacgctagtgaaacacgttctgctttgttcggtgataaaaatccgcag
caagaaagggagagaagccagagccagcttaaacaaaccgaatctgagttcaatgaagca
cagaagttatttacgcaagcgcagggtgatgtaaaagctgtctctggggaaacaaaaacc
cttgaatcatcggtaaacgagttaactaagaatgctgaagagcggcttgaagagtggaat
attgctttaataggcagccagttcgactcagtatcggactttgaagctgcgttacttgaa
actgaagagaaacaacagctaacagaacagaagcagtgcttagagtcagctattgaaaaa
gccaaaacgctggttgaatcgacatcaaaagaactagaacgcttgatggcagtccctcag
tccagagagtatcaggaaactacgattgatgaggttaaagagcagagtattgagacggcg
aaaaccttagaagagacaaccaaacgtctaggcgaagtagaaaatgagctggaatctgac
aagcagcgcagagaaggacaaaaagcgttgtttgaagagatagaagcctatcgcgaggtc
tatgacgatcttcaatacctgaactccctgatagggtctgcggatggtaataagttccgg
aagtttgcacagggtctgacactggataatcttgtctacttagcaaataaacagctcact
cgtctgcacggtagatacgagctgcaacgtggttccggggaaggattagagctggcggtt
ctggatacctggcagggtgacgtagtacgtgataccaaaacactgtctggtggtgaaagc
tttctggtaagcctcgctctcgcgcttggcctgtctgatctggtgagtcataaaaccagt
attgactcgttgttccttgatgaaggtttcggtactttggatgcagaaaccttggatctg
gctctcgatgcattggacagcctgaacgcgtcgggaaaaatgattggagtaatcagtcac
atcgaagcgatgaaagagcgtattccggtacagcttaaagttatgaaaaagagtggcctt
ggcgtgagtgagcttgatagccggtatagggttagctctcgttga
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