Vibrio iocasae: SNR28_09140
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Entry
SNR28_09140 CDS
T11169
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vic03000
]
SNR28_09140
03036 Chromosome and associated proteins [BR:
vic03036
]
SNR28_09140
Transcription factors [BR:
vic03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SNR28_09140
Chromosome and associated proteins [BR:
vic03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SNR28_09140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_34
E3_UFM1_ligase
DDRGK
Fe_dep_repress
HTH_20
LexA_DNA_bind
DUF7343
HTH_Mga
HTH_1
HTH_39
HTH_11
HTH_27
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XHF82344
LinkDB
All DBs
Position
1:complement(2057354..2057827)
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AA seq
157 aa
AA seq
DB search
MTSTLDRTDLEILRVLHSKGRISMVELAKQVHLTTSPCSDRVKRLEKEGYIKGYHAELNA
EKLGLDVQVFIHIRLDQSSFSIFDKFAKEVDLMPEIEECYSLSGDFDAMIKVRVKDMKAY
QSFMSTKLGSLPGVIQTRSEVVIQEHKISFGINPEQI
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaacattagataggacagacttagaaatactgagagtgcttcactcgaaagga
cgtatttcgatggtagagcttgcgaagcaggttcaccttactacttctccttgctccgat
agagttaagagattggagaaagaaggatatattaaggggtatcacgcagagctcaacgca
gaaaaacttggcttagatgttcaggtttttatccatattcgacttgatcaatcaagcttc
tcgatctttgataagttcgcaaaagaagtcgatttaatgcctgagattgaagagtgctac
tcattgtcgggagactttgatgccatgattaaggtgagagtgaaagatatgaaagcttac
caaagctttatgtctactaagcttggctccctcccaggggttatacaaacacgaagtgaa
gttgttatccaagagcacaaaatcagctttggtatcaacccagagcagatataa
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integrated database retrieval system
