Vibrio iocasae: SNR28_10520
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Entry
SNR28_10520 CDS
T11169
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vic Vibrio iocasae
Pathway
vic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNR28_10520 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vic03019
]
SNR28_10520 (groL)
03110 Chaperones and folding catalysts [BR:
vic03110
]
SNR28_10520 (groL)
03029 Mitochondrial biogenesis [BR:
vic03029
]
SNR28_10520 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vic04147
]
SNR28_10520 (groL)
Enzymes [BR:
vic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SNR28_10520 (groL)
Messenger RNA biogenesis [BR:
vic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SNR28_10520 (groL)
Chaperones and folding catalysts [BR:
vic03110
]
Heat shock proteins
HSP60 / Chaperonin
SNR28_10520 (groL)
Mitochondrial biogenesis [BR:
vic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SNR28_10520 (groL)
Exosome [BR:
vic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SNR28_10520 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SNR28_10520 (groL)
Exosomal proteins of breast cancer cells
SNR28_10520 (groL)
Exosomal proteins of colorectal cancer cells
SNR28_10520 (groL)
Exosomal proteins of bladder cancer cells
SNR28_10520 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XHF85171
LinkDB
All DBs
Position
2:225045..226691
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCADTKAIAQVGTISANSDETVGNIIAEAMEKVGRDGVITVEEG
QALHDELDVVEGMQFDRGYLSPYFINNQEAGSVDLENPFILLIDKKVSNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKAAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEVGLELEKVTLEDLGQAKRITITKENTTIIDGVGEEAMINGRVTQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALV
RAASKVAGLEGANEEQNVGIRVALRAMEAPLRQIVANAGDEESVVANNVKGGEANYGYNA
ATGEYNDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDMPAGDAPAMPDMGGMGG
MGGMPGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaacgacgcacgagttaaaatgctagaaggtgta
aacgttctggctgatgctgtaaaagtaacacttggccctaaaggccgtaacgtagtactg
gacaaatctttcggtgctccgactatcactaaagatggtgtttctgtagcgcgtgaaatt
gaactggaagacaagttccagaacatgggtgcacaaatggttaaagaagttgcatctcag
gcaaacgatgcagcgggtgacggtacaacaacagcaactgtactggcacaatcaatcgta
aacgaaggtcttaaagcggtagctgcgggtatgaacccaatggatcttaagcgtggtatc
gacaaagcagttgcagcagcagttgaagagctaaaagcactttctgttccatgtgcagat
actaaagcaatcgcgcaggttggtactatctctgcaaactctgacgagactgtaggtaac
atcattgctgaagcaatggaaaaagttggccgcgacggtgttatcactgttgaagaaggt
caggctctacatgatgagctagacgtagtagaaggtatgcagtttgaccgcggttacctt
tctccttacttcatcaacaaccaggaagcgggttctgttgatctggaaaacccattcatc
cttctgattgataagaaagtatcaaacatccgtgaacttcttccaactctggaagcagta
gcaaaagcatctcgtcctcttctaatcatcgctgaagatgtagaaggtgaagcactagca
actctagttgtgaacaacatgcgcggtattgttaaagctgcagctgttaaagcgcctggc
tttggtgatcgtcgtaaagcaatgcttcaggacatcgctatcctaactgcgggtactgtt
atctctgaagaagttggtctggaacttgagaaagtaactcttgaagatctaggtcaggcg
aagcgcatcacaatcactaaagaaaacacaactatcatcgatggtgtgggtgaagaagcg
atgatcaacggccgtgttactcagattcgtcagcagattgaagaagcaacttctgactac
gacaaagagaagctacaagagcgtgttgctaagctagctggtggtgttgcagtaattaaa
gttggtgcagcaactgaagtagaaatgaaagagaagaaagaccgcgtagaagacgcactt
cacgcaactcgcgcagcagttgaagaaggtgttgttgctggtggtggtgtcgctcttgtt
cgtgcagcatctaaagttgctggccttgaaggtgcaaacgaagagcagaacgttggtatc
cgcgtagcacttcgtgcaatggaagcaccacttcgtcaaatcgttgccaacgcaggtgat
gaagagtctgtggtagctaacaatgttaaaggtggtgaagctaactacggctacaacgca
gcaactggtgaatacaacgacatgatcgagatgggtatcctagatccaactaaagtaact
cgttcagctctacagttcgcagcatctgttgctggcctgatgatcactacagaagctatg
gttactgacatgcctgctggcgacgctccagcaatgcctgatatgggcggcatgggtggt
atgggtggcatgccaggcatgatgtga
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