Vibrio iocasae: SNR28_10890
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Entry
SNR28_10890 CDS
T11169
Name
(GenBank) autotransporter assembly complex family protein
KO
K07278
translocation and assembly module TamA
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_10890
Transporters [BR:
vic02000
]
Other transporters
Pores ion channels [TC:
1
]
SNR28_10890
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
PilW
Motif
Other DBs
NCBI-ProteinID:
XHF85242
LinkDB
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Position
2:280088..281803
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AA seq
571 aa
AA seq
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MIKRTVPLLVLSLTCIQSLQAATSLDIKGLEGALSENVNAYISAIPEGDYSTSLRFRSQV
QDNIINALQALGYYEPEISFVVSEDEKSLTVNVDPGEPVKLEVVDIKLIGAAEGDPEFQK
LLKSSKLKKGAVLNHGDYELIKSGIRNLALARGYFDGDFAETRLEVSPEVKQAFVHLYYD
SGDRYHFGETTIEGSQIDEERVRSLAPYESGEPYLSSKVGLFNQRMSNTDWFSSVFVKPD
LEHVGKQRQLPMRVSLAPQSKNQIETGLGYSTDVGVRGTLKWKKPWVNRRGHSFDSNLSL
SDPEQLITFGYEIPLEDVLRDYYRIEYGMKNEENNDTDSFESSLSLERHWVLDSGWHRTA
SVRILHEDFTQGVQDDDIAMILPGISFSRTQTSGGSMPMSGNKQTIAFEVSDKNIVSRAR
LARVLGRTAWIRSAGQNHRGLARADFNANFVENIEDVPPSIRFFAGGDNTIRGYDYESIS
PKDSSGKLIGAKYMVTTSLEYQYRIKGDWWAATFVDYGDAWSEDLPDGKMGTGVGVRWAS
PVGPVRLDFAWGLQSDPGERFRFHFTLGPEL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagaacagttcctttattagttttgtctttgacgtgtattcagtctctgcaa
gctgcgacctcattagatattaaagggttggaaggggcgttgtctgaaaatgtgaatgcc
tatatctccgctattcctgagggagactattctacttcgttgcgctttcgctctcaggtt
caggacaacattatcaacgcacttcaggcgttaggatactacgagccagaaatctcattt
gttgtttcagaagatgagaaatcgctgacagtaaatgtagacccgggagagccggtaaag
ttagaagttgtcgacataaaactaattggcgcagcagagggtgacccagagttccaaaag
cttcttaaatcaagcaagttaaagaaaggtgccgtactcaatcacggtgactatgagctg
ataaagtctggcattcgcaaccttgcgttagccagaggctactttgatggtgattttgcc
gaaacaagattagaagtatctccagaagtaaaacaggccttcgtgcacctctattacgac
agtggtgacaggtatcattttggtgaaaccacaatcgaaggaagtcagatagatgaagaa
cgggttagatcgcttgctccctatgaatcaggggaaccttatctctcctctaaagtcggc
ttgtttaaccaacgtatgtctaatactgactggttttcttcggtatttgtaaagccggat
ttggagcatgtcggcaagcagcgtcaactgccaatgagagtttctctagcaccgcaatct
aagaatcagatagagacaggtttaggttactctacggatgttggtgtccggggaacgctt
aagtggaagaagccgtgggtgaacagacgtggacacagttttgattctaacctttcgctc
tctgacccagaacaactaattaccttcggttacgaaataccgttggaagacgtacttcgt
gactactatcgaatcgaatatggtatgaaaaacgaagagaacaacgatacggatagtttc
gagtccagcctgtctttggagaggcattgggtgcttgatagtggctggcacaggacggct
tcagttagaattttgcatgaagactttacccagggtgttcaagatgacgatattgcgatg
attttaccgggcatctctttttccagaacgcagacgagtggtggttcaatgccaatgtcc
ggcaacaagcagactattgcttttgaagtgtcggataaaaatattgtatccagagcaaga
ttagcgagagtcttgggtagaaccgcatggatccgtagcgcaggtcaaaatcacagagga
ttagcacgggctgattttaacgctaactttgttgaaaatatcgaggatgttccaccttcg
attcgattctttgccggtggtgacaataccatcagaggctatgactatgagtcaatttcc
cctaaagattcaagcggtaagttgatcggtgcaaagtatatggtaacaaccagtctggag
taccaataccgcattaaaggtgactggtgggcagccacctttgtcgattatggtgacgcc
tggagtgaagatcttcctgacggaaagatgggtactggtgtcggtgttcgttgggcatca
cccgtcgggccagtcagattggattttgcctgggggctacagtcagatcccggagaaagg
ttccgtttccatttcactttggggcctgagctatga
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