Vibrio iocasae: SNR28_11195
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Entry
SNR28_11195 CDS
T11169
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vic Vibrio iocasae
Pathway
vic00061
Fatty acid biosynthesis
vic00071
Fatty acid degradation
vic01100
Metabolic pathways
vic01212
Fatty acid metabolism
vic02024
Quorum sensing
vic04146
Peroxisome
Module
vic_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SNR28_11195
00071 Fatty acid degradation
SNR28_11195
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SNR28_11195
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNR28_11195
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vic01004
]
SNR28_11195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vic04147
]
SNR28_11195
Enzymes [BR:
vic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SNR28_11195
Lipid biosynthesis proteins [BR:
vic01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SNR28_11195
Exosome [BR:
vic04147
]
Exosomal proteins
Exosomal proteins of breast milk
SNR28_11195
Exosomal proteins of breast cancer cells
SNR28_11195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XHF85301
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All DBs
Position
2:354860..356668
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AA seq
602 aa
AA seq
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MANLDFHIVTRIRDQVARGGERTALRHKVNNAWKSISWKQFGEKLDALSLALLAQGLKAQ
DKVGIYSNNMPRWTIADVAALQVRCITVPIYPTNTADQAAYITQNADVKVLFVGEQPQFD
AAISTFDQCEKLELIVAMSDDIDLKNHPAAMSWDTFIAKGEHEYQSQFEERLKSADMDDL
FTLIYTSGTTGQPKGVMLDYRNIGTQCESHDKSMTVTPEDVSLAFLPLSHVYERAWTFYV
LYKGATNCYLQDTMQVRDALGEIKPTVMCAVPRFYEKIFSAIHEKVQRAPFQRKMVFTWA
VNMGARVAACKQEGREPSWLLKKSYKVADKVVLNKLRELLGGRINFMPCGGAKLDATIGR
FFHAIGINVKLGYGMTETTATVSCWRDNVFNPDSIGTLIPGAEVKIGENSEILVRGPMVM
RGYYKMPEETEKAFDEQGFLKTGDAGEFDADGNLFITDRIKELMKTSGGKYIAPQVVEGA
IGKDHFIEQIAVIADTRKFVSALIVPSYEALEEYAKELNIKYQDRLELLKNSQIVEMLDK
RVEELQKDLAKFEQVKKFTLLPKAFSMDKGELTPTQKLRRKVINERYEDEIEEMYSEKNT
KK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttagactttcatattgttacaagaatcagagatcaggttgcccgtggtgga
gagcgtaccgcacttcgtcacaaagttaataatgcatggaagagcattagctggaagcaa
tttggtgaaaagctagacgcactgtcgctagcacttttggctcagggattgaaagctcag
gataaggtaggtatatactcgaataatatgccgcgatggacaattgccgatgtagctgca
ttgcaggtccgttgtattaccgttccaatctatccaaccaacactgctgatcaagcagca
tacatcacccaaaatgcagatgtaaaagtcctatttgttggtgagcaacctcaatttgat
gcagcaataagcacatttgatcagtgtgaaaaacttgaattgattgtcgcgatgtcagat
gacatcgacctgaagaatcatcctgctgcgatgtcttgggatacctttattgctaaaggt
gagcacgagtaccagagtcagtttgaagagcgcttaaagagtgctgatatggatgatctg
ttcaccctaatctatacatcggggacaacgggtcagcctaaaggtgtcatgctggattat
cgaaatataggtactcagtgtgaaagccacgataaaagcatgactgtcacacctgaagat
gtttctctcgcattcttaccgctttcacatgtttatgagcgagcatggacattttatgtt
ctctataaaggggcgaccaactgctacctgcaagacaccatgcaggtaagagatgcgttg
ggtgaaatcaaacctactgtgatgtgtgcggtaccgcgcttctacgaaaaaatcttttca
gctatccatgaaaaagtacagcgagcaccatttcagagaaagatggtgtttacctgggct
gtgaacatgggagcaagagtcgcagcctgcaagcaagaaggtcgcgaaccttcctggctg
ttgaagaagagctataaagttgcagataaagttgtactgaataagctaagagagcttctt
ggtggcagaatcaactttatgccatgtggtggtgctaaattggatgcgacgataggacga
ttcttccatgcgattggtatcaacgtaaagcttggctacggaatgacagaaacgacagca
acggtttcttgctggcgggacaatgtattcaaccctgattcaataggtactctgatccct
ggggcagaagttaaaattggggaaaacagtgagattctggttcgtggtccaatggttatg
cgtggctactataaaatgccagaagaaacggagaaggcctttgatgaacaaggtttcctt
aaaacgggtgatgctggcgaatttgatgctgatggcaacctgtttataaccgaccgtatt
aaagagttgatgaaaacctctggtggtaaatacatcgcaccacaggttgttgaaggtgct
attggtaaagaccacttcatcgagcagattgccgtaattgctgatactcgtaagtttgtg
tcggctctgattgttccaagttatgaagcacttgaagagtatgccaaagaactgaacatt
aagtaccaagatcgacttgaactgcttaagaacagtcaaatcgtcgaaatgctggataag
cgtgttgaagagttacagaaagatcttgctaagtttgaacaggtgaaaaaattcacattg
cttccaaaggcattctcaatggataaaggtgagttaacacctactcagaagcttcgccgt
aaagtcatcaatgaacgttatgaagatgaaatcgaagagatgtattctgagaaaaatacc
aagaagtaa
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