Vibrio iocasae: SNR28_12450
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Entry
SNR28_12450 CDS
T11169
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_12450 (bamB)
Transporters [BR:
vic02000
]
Other transporters
Pores ion channels [TC:
1
]
SNR28_12450 (bamB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_FAM234A_B
Beta-prop_KIB1-4
Motif
Other DBs
NCBI-ProteinID:
XHF85523
LinkDB
All DBs
Position
2:612752..613912
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AA seq
386 aa
AA seq
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MKKLFSRLLVGSLIAAGLAGCSSEEDTVIMAPVPQVSSEFTPDSVWSSSIGNGVGQYFSK
LTPEFEYEKLFIAARDGEVKALDPESGKLIWKTDLEGDISARLSGGITASYGKVFIGSEN
AELIALDQETGEELWRSTVVGEILAKPVTDNNYVIVNTSRGMLTALDADTGSEVWTISTE
VPNLTLRGDSTPNTTSGGIFWGTASGRLAAAIVSRGQLIWQQPVGTPKGATEIDRLVDSD
ASPIILGSTLYTVGINGQLVAIDLRSGAPVWKRKYSSASDMATDGAKIFVLTDNDHLAAV
DIRSGTEIWTNSSMENRLLTAPQIINGYLVVGDSEGYLHWLDRETGEFVAQQLVNDSGFA
VGPVELTDGYVIVTRNGKIKKLRIAE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattattcagccgattgttggtaggttcacttattgctgccggactcgctggt
tgttcaagtgaagaagacacggtcatcatggcgcctgtgcctcaggtaagcagtgagttc
acccctgacagtgtttggtcttcatctattggtaatggagtaggccagtacttctccaag
ctaacacctgaattcgagtacgaaaaactgtttattgcggctcgcgatggtgaggtgaag
gcgttggatccagagagtggaaagcttatctggaaaacggacctggaaggcgatatctct
gcacgcttgtctggtggtatcacagcttcctacggaaaggtctttattggttctgaaaac
gcagaactgatagcgctagatcaggaaaccggtgaagagctttggcgttctacggttgtt
ggcgagattcttgcgaagcctgttacagacaataactacgttatcgtaaatacaagtcgc
ggaatgctcactgctctggatgcagatactggttctgaagtttggactatcagcactgaa
gttccaaacctgactttgcgtggtgatagtacgccaaatactacatcaggtggtattttc
tggggtacagcaagtggtcgacttgcagctgcgatagtttcgcgtggtcagcttatctgg
cagcaacctgttggtacgccaaaaggtgcgacagagattgaccgtctggttgattccgat
gcttcaccaattattttaggtagcactctttatacggtgggtatcaacggccagcttgta
gcgattgatcttcgttctggtgctcctgtctggaagcggaaatattcttctgcttcagac
atggcgacagatggtgcaaagatttttgttttgacagataacgatcatcttgcagctgta
gatattcgaagtggtacggagatatggacgaactcgtctatggagaaccgtctgctaact
gctccgcaaattattaatggctatctggttgttggagatagtgaaggttaccttcattgg
cttgatcgtgagaccggtgagtttgttgctcagcaattggtaaacgacagtggttttgct
gttggtccggttgagcttacagatggctatgtaatagtgactcgtaatggcaaaataaag
aaactacgaatcgctgaataa
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