Vibrio iocasae: SNR28_13130
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Entry
SNR28_13130 CDS
T11169
Name
(GenBank) substrate-binding domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vic03000
]
SNR28_13130
Transcription factors [BR:
vic03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SNR28_13130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_Tnp_ISL3
HTH_7
HTH_26
SchA_CurD
HTH_28
TetR_N
HTH_38
MerR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
XHF85654
LinkDB
All DBs
Position
2:complement(762827..763825)
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AA seq
332 aa
AA seq
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MATIKDVAREAGVSVATVSRVINKSPKASATSIESVQKAMKKLGYRPNANARALVNQSTN
TVGVLVADVSDPFFGTMVKAIDNIAQAHGKHILICNGYHDQRDEKEAIELLINSRCESLI
IHSKALSDETIIEYANEVKGLVVINRHIPELADRCISLDNRKGSYLATEFLIRHGHKKIA
HIASQHQIEDADERIEGYLSAMRDNGLDAPKSFIEYGEPNSEGGEIAATNLLTKSVPFTA
VVAYNDYMAAGAISVFEENGIKVPQEMSIVGFDDGLIAKYVHPKLTTIRYPIQLMAEKAA
RLSLELAQGNETEQEANRFSPTIVRRMSVEKQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccataaaagacgtagcaagagaagctggcgtatcagtggcaactgtgtcacga
gtgattaataaatcccctaaagcaagtgcgacatccattgagtctgtacaaaaagcgatg
aaaaagctcggttacagaccaaatgctaatgcccgcgcactggtaaaccaaagtacaaac
actgtcggtgtacttgttgcggatgtatctgacccattcttcggcaccatggtcaaggcg
atcgacaacatcgctcaggcacacggaaaacatatacttatctgtaacggttaccacgac
cagagagatgagaaagaagcgatcgagcttctgataaacagccgctgtgaatcactgata
atccattcgaaagctctttctgatgaaaccattattgaatatgccaatgaggtaaaggga
ttagttgttattaaccgccatatccctgagcttgctgatcgttgtatctctctggacaac
cgcaaaggttcataccttgcgaccgagttcttgatccgtcatggacataagaaaattgca
catatcgcatctcaacaccaaattgaggatgccgatgagcgtatcgaaggttatctgtca
gcgatgcgtgataatggccttgatgcaccaaaaagctttattgagtacggtgaaccaaac
agtgaaggtggtgaaattgccgcaacaaacctgttaactaaatcagtgccgtttactgct
gttgttgcctataacgactacatggcggccggtgcaatatctgtgtttgaagaaaatggc
atcaaagtgccacaggagatgtcgattgtcggattcgatgatggattaattgcaaaatac
gtacatcctaagctgacgacgattcgctacccaatccagttaatggctgaaaaagcagca
agactctctttagagcttgcgcagggtaacgaaactgagcaggaagcgaaccgtttctct
ccaaccatcgttagacggatgtcggtagaaaaacagtaa
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