Vibrio iocasae: SNR28_13555
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Entry
SNR28_13555 CDS
T11169
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vic Vibrio iocasae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vic03016
]
SNR28_13555 (miaB)
Enzymes [BR:
vic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SNR28_13555 (miaB)
Transfer RNA biogenesis [BR:
vic03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SNR28_13555 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
XHF85736
LinkDB
All DBs
Position
2:complement(854641..856065)
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEDPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKEDVIIGVGGCVATQEGDHIRERAPFVDVIFGPQTLHRLPEMIKSSRS
NEAPVMDISFPEIEKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGDICSFADLLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
HISSDFIVGFPGESDQDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDLAEQTKKE
RLYELQQQVNSQAMRYSRQMLDTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKITDVFPNSLRGELVRTEKEMDLRVVTSPSEMMEKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgatctgcttaatgccgctaacggttacgagctgaccgaagatccagaagag
gcagacgtacttctccttaacacctgttcgatccgtgaaaaggcgcaagaaaaggtattc
caccaacttggccgctggaaaacgcttaaagacaaaaaggaagacgtgatcattggtgta
ggtggctgcgttgcaacacaggaaggcgatcatatccgtgaacgtgcaccttttgttgat
gttatctttggcccgcaaactctgcaccgtcttccagagatgattaaatcatcacgcagc
aacgaagcacctgtgatggatatttcattccctgagattgaaaagttcgaccgcttgcct
gagcctcgtgcagaaggggcaactgcgttcgtttctatcatggaaggctgttcgaaatac
tgtacttactgcgtagtgccatacactcgcggtgaagaagttagccgtcctatggatgat
gtactgttcgagattgcgcaacttgcagaacaaggtgtacgagaagtaaacctacttggc
cagaacgtaaacgcataccgtggcccaatgcatgatggtgacatctgctcttttgccgac
ctgctgcgcttagttgcatccatcgatggcatcgaccgtattcgctttacaacaagccac
ccgcttgagttcactgacgatatcattgcggtatacgaggatactcctgagctagtgagc
ttccttcacctaccagtgcaaagtggttcagaccgcatcctgactatgatgaagcgccct
cataccgctatcgagtataaatctattattcgtaagctacgtaaggctcgtcctgatatt
catatcagctcagactttatcgtcggtttcccaggtgagtccgaccaggatttccaggac
acgatgaaattaatcaaagatgtcgatttcgacatgagcttcagctttattttctctcca
cgtcctggtacaccagcagcggattacccatgtgatcttgctgaacaaaccaagaaagag
cgcctgtatgaactgcaacagcaggtaaacagccaggctatgcgctactcccgtcagatg
ctggacaccgagcaacgcgttctggttgaaggcccatctaagaagaacctaatggagtta
cgtgctcgtaccgagaacaaccgcgttgtaaactttgaaggctctgctgaccttatcggc
cagttcgttgatgtgaaaattaccgacgtattcccgaactcacttcgtggtgagctagta
cgtacagagaaagaaatggaccttcgtgtagtgacctctccaagtgaaatgatggaaaaa
actcgtcgagaagatgaattaggcgttgcaacttttacgccttag
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